RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SLC6A2P23975 617 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 SCARB2Q14108 478 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 C3orf36Q3SXR2 165 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 VHLLQ6RSH7 139 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 FAM169BQ8N8A8 192 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 SLC47A1Q96FL8 570 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 KCNK17Q96T54 332 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 VRK1Q99986 396 aaPredicted RBP19.65■□□□□ 0.74
ACTN1-220ENST00000556433 IKZF5Q9H5V7 419 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 TMEM27Q9HBJ8 222 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 MOV10Q9HCE1 1003 aaKnown RBP19.65■□□□□ 0.74
ACTN1-220ENST00000556433 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.65■□□□□ 0.74
ACTN1-220ENST00000556433 FKBP7Q9Y680 259 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 GMEB1Q9Y692 573 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 TRBV5-3A0A0A0MS03 114 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 LOC102725191A0A1B0GVB3 256 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 B9A039 149 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 IGLV1-44P01699 117 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 OR4A8P0C604 315 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 CBR1P16152 277 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 GPX2P18283 190 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 PDLIM4P50479 330 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 RGS8P57771 180 aaPredicted RBP19.64■□□□□ 0.73
ACTN1-220ENST00000556433 NCALDP61601 193 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 CEACAM16Q2WEN9 425 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 FAM91A1Q658Y4 838 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 CYB5R2Q6BCY4 276 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 SLC46A3Q7Z3Q1 461 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 PIK3C3Q8NEB9 887 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 ZNF837Q96EG3 531 aaPredicted RBP19.64■□□□□ 0.73
ACTN1-220ENST00000556433 SORCS2Q96PQ0 1159 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 ZNF607Q96SK3 696 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 TMEM38AQ9H6F2 299 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 SEC61A2Q9H9S3 476 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 CRLF2Q9HC73 371 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 KLHL14Q9P2G3 628 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 SLC13A4Q9UKG4 626 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 CORO2BQ9UQ03 480 aa19.64■□□□□ 0.73
ACTN1-220ENST00000556433 PRORSD1PA6NEY8 169 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 AKAP8O43823 692 aaKnown RBP19.63■□□□□ 0.73
ACTN1-220ENST00000556433 SERPINB7O75635 380 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 NQO1P15559 274 aaKnown RBP19.63■□□□□ 0.73
ACTN1-220ENST00000556433 AQP1P29972 269 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 CALCRP30988 508 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 ATP4BP51164 291 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 LSM11P83369 360 aaKnown RBP eCLIP19.63■□□□□ 0.73
ACTN1-220ENST00000556433 MFSD13AQ14CX5 517 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 OR1Q1Q15612 314 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 ADIPOQQ15848 244 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 OR4F15Q8NGB8 312 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 DYDC1Q8WWB3 177 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 ATP6V1G3Q96LB4 118 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 OR2M2Q96R28 347 aa19.63■□□□□ 0.73
ACTN1-220ENST00000556433 TESQ9UGI8 421 aaKnown RBP19.63■□□□□ 0.73
ACTN1-220ENST00000556433 A0A087WUJ7 227 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 MS4A18H0YCH9 400 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 TRAF3IP2O43734 574 aaPredicted RBP19.62■□□□□ 0.73
ACTN1-220ENST00000556433 PDE5AO76074 875 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 IGKV3-15P01624 115 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 CELA3BP08861 270 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 IGHV4-31P0DP07 118 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 HGFACQ04756 655 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 SQLEQ14534 574 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 ADRM1Q16186 407 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 CARTPTQ16568 116 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 MS4A18Q3C1V0 323 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 UEVLDQ8IX04 471 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 ANKS4BQ8N8V4 417 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 ADPRHL1Q8NDY3 354 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 BHLHE22Q8NFJ8 381 aaPredicted RBP19.62■□□□□ 0.73
ACTN1-220ENST00000556433 OR6S1Q8NH40 331 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 EPYCQ99645 322 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 CDC42EP3Q9UKI2 254 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 CORINQ9Y5Q5 1042 aa19.62■□□□□ 0.73
ACTN1-220ENST00000556433 FBN1P35555 2871 aaKnown RBP19.62■□□□□ 0.73
ACTN1-220ENST00000556433 A0A0B4J2E0 115 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 A0A1B0GX12 115 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 VSTM5A8MXK1 200 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 M0R3G1 203 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 TPST2O60704 377 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 HPRP00739 348 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 ARR3P36575 388 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 IDH3GP51553 393 aaPredicted RBP19.61■□□□□ 0.73
ACTN1-220ENST00000556433 GGTLC2Q14390 218 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 EFNB3Q15768 340 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 RUNDC3AQ59EK9 446 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 PHYHD1Q5SRE7 291 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 CARD17Q5XLA6 110 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 DLEU7Q6UYE1 221 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 ARMC8Q8IUR7 673 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 TMEM123Q8N131 208 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 HIPK4Q8NE63 616 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 SLC41A3Q96GZ6 507 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 FOXN4Q96NZ1 517 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 WFDC6Q9BQY6 131 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 PIMREGQ9BSJ6 248 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 ASPNQ9BXN1 380 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 PLK3Q9H4B4 646 aa19.61■□□□□ 0.73
ACTN1-220ENST00000556433 YLPM1P49750 1951 aaKnown RBP19.61■□□□□ 0.73
ACTN1-220ENST00000556433 RNF212BA8MTL3 300 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms