RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 LRRC37BQ96QE4 947 aa10.13□□□□□ -0.79
SLIRP-206ENST00000556375 KCTD14Q9BQ13 255 aaPredicted RBP10.13□□□□□ -0.79
SLIRP-206ENST00000556375 PRSS27Q9BQR3 290 aa10.13□□□□□ -0.79
SLIRP-206ENST00000556375 FKRPQ9H9S5 495 aa10.13□□□□□ -0.79
SLIRP-206ENST00000556375 BEX4Q9NWD9 120 aaPredicted RBP10.13□□□□□ -0.79
SLIRP-206ENST00000556375 NPAP1Q9NZP6 1156 aa10.13□□□□□ -0.79
SLIRP-206ENST00000556375 AMDHD2Q9Y303 409 aa10.13□□□□□ -0.79
SLIRP-206ENST00000556375 NOX1Q9Y5S8 564 aa10.13□□□□□ -0.79
SLIRP-206ENST00000556375 SLC25A15Q9Y619 301 aa10.13□□□□□ -0.79
SLIRP-206ENST00000556375 ARID1AO14497 2285 aa10.13□□□□□ -0.79
SLIRP-206ENST00000556375 MS4A18H0YCH9 400 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 KPNA4O00629 521 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-206ENST00000556375 PLPP3O14495 311 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 HS3ST1O14792 307 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 SHOX2O60902 331 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-206ENST00000556375 UPK3AO75631 287 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 PLAUP00749 431 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 IGF2P01344 180 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 SH3BGRP55822 239 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-206ENST00000556375 POU3F1Q03052 451 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-206ENST00000556375 LGALS3BPQ08380 585 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 PIN1Q13526 163 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-206ENST00000556375 MS4A18Q3C1V0 323 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 ADAM5Q6NVV9 412 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 KLHL24Q6TFL4 600 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 CBLL1Q75N03 491 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 VTCN1Q7Z7D3 282 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 TMEM123Q8N131 208 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 ANKS4BQ8N8V4 417 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 ANKK1Q8NFD2 765 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 OR52N5Q8NH56 324 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 GEMIN6Q8WXD5 167 aaKnown RBP10.12□□□□□ -0.79
SLIRP-206ENST00000556375 PIGTQ969N2 578 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 BOD1Q96IK1 185 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 PRRC1Q96M27 445 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 OR2M2Q96R28 347 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 CCL19Q99731 98 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 PIP5K1AQ99755 562 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 NANSQ9NR45 359 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 SLC17A5Q9NRA2 495 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 TAGLN3Q9UI15 199 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 RIMS3Q9UJD0 308 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 ZNF229Q9UJW7 825 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 MAGED1Q9Y5V3 778 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-206ENST00000556375 MED13LQ71F56 2210 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 ALPK2Q86TB3 2170 aa10.12□□□□□ -0.79
SLIRP-206ENST00000556375 DPRXA6NFQ7 191 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 RPL36A-HNRNPH2H7BZ11 118 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 CLOCKO15516 846 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 ZNF682O95780 498 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 CH25HO95992 272 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 SERPINA1P01009 418 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 MT-ND1P03886 318 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 IFNW1P05000 195 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 ASAH2BP0C7U1 165 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 ADORA3P0DMS8 318 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 HLA-DOBP13765 273 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 IFNA8P32881 189 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 UGT2B15P54855 530 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 SLC25A3Q00325 362 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 ROR2Q01974 943 aaKnown RBP10.11□□□□□ -0.79
SLIRP-206ENST00000556375 IFI44LQ53G44 452 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 HMBOX1Q6NT76 420 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 KLHL17Q6TDP4 642 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 TMEM108Q6UXF1 575 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 LINGO2Q7L985 606 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 SLC46A3Q7Z3Q1 461 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 PXKQ7Z7A4 578 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 NKAIN4Q8IVV8 208 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 OFCC1Q8IZS5 231 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 GPR137CQ8N3F9 429 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 ZNF611Q8N823 705 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 WDR31Q8NA23 367 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 PIK3C3Q8NEB9 887 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 KBTBD8Q8NFY9 601 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 OR1K1Q8NGR3 316 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 TMEM255BQ8WV15 326 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 TMEM239Q8WW34 195 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 AKAP1Q92667 903 aaKnown RBP eCLIP10.11□□□□□ -0.79
SLIRP-206ENST00000556375 FAM162AQ96A26 154 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 HSH2DQ96JZ2 352 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 HS6ST2Q96MM7 605 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 CCT8L2Q96SF2 557 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 OBP2BQ9NPH6 170 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 MEPEQ9NQ76 525 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-206ENST00000556375 ARL8BQ9NVJ2 186 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 ADA2Q9NZK5 511 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 A4GNTQ9UNA3 340 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 VPS13CQ709C8 3753 aa10.11□□□□□ -0.79
SLIRP-206ENST00000556375 HEATR1Q9H583 2144 aaKnown RBP10.1□□□□□ -0.79
SLIRP-206ENST00000556375 A0A1W2PR80 420 aa10.1□□□□□ -0.79
SLIRP-206ENST00000556375 ABCD4O14678 606 aa10.1□□□□□ -0.79
SLIRP-206ENST00000556375 TMCC2O75069 709 aa10.1□□□□□ -0.79
SLIRP-206ENST00000556375 OR6A2O95222 327 aa10.1□□□□□ -0.79
SLIRP-206ENST00000556375 FAM107AO95990 144 aa10.1□□□□□ -0.79
SLIRP-206ENST00000556375 WNT11O96014 354 aa10.1□□□□□ -0.79
SLIRP-206ENST00000556375 NCK1P16333 377 aa10.1□□□□□ -0.79
SLIRP-206ENST00000556375 CDH2P19022 906 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-206ENST00000556375 AHCYP23526 432 aa10.1□□□□□ -0.79
SLIRP-206ENST00000556375 PTAFRP25105 342 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms