RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 NRIP3Q9NQ35 241 aa8.26□□□□□ -1.09
ACTN1-218ENST00000556343 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
ACTN1-218ENST00000556343 SCN3BQ9NY72 215 aa8.26□□□□□ -1.09
ACTN1-218ENST00000556343 TAS2R5Q9NYW4 299 aa8.26□□□□□ -1.09
ACTN1-218ENST00000556343 EMC3Q9P0I2 261 aa8.26□□□□□ -1.09
ACTN1-218ENST00000556343 BLOC1S6Q9UL45 172 aa8.26□□□□□ -1.09
ACTN1-218ENST00000556343 ZNF175Q9Y473 711 aa8.26□□□□□ -1.09
ACTN1-218ENST00000556343 ZFHX4Q86UP3 3567 aa8.26□□□□□ -1.09
ACTN1-218ENST00000556343 FRYQ5TBA9 3013 aa8.26□□□□□ -1.09
ACTN1-218ENST00000556343 CHD8Q9HCK8 2581 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 LAMA5O15230 3695 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 CELSR3Q9NYQ7 3312 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 A0A1B0GTH9 108 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 SH3D21A4FU49 640 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 FIGNL2A6NMB9 653 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 CENPBD1B2RD01 187 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 TLX2O43763 284 aaPredicted RBP8.25□□□□□ -1.09
ACTN1-218ENST00000556343 AHCYL1O43865 530 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 WISP1O95388 367 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 TXNDC12O95881 172 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 IGHMP01871 453 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 TP53P04637 393 aaPredicted RBP8.25□□□□□ -1.09
ACTN1-218ENST00000556343 F13BP05160 661 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 IGFBP1P08833 259 aaPredicted RBP8.25□□□□□ -1.09
ACTN1-218ENST00000556343 SDHAP31040 664 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 PTGS2P35354 604 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 ACVR1BP36896 505 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 SNRPGP62308 76 aaKnown RBP8.25□□□□□ -1.09
ACTN1-218ENST00000556343 ERVK-25P63136 954 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 H3F3AP84243 136 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 HSF1Q00613 529 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 TEKQ02763 1124 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 LGALS3BPQ08380 585 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 RASGEF1BQ0VAM2 473 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 ITGADQ13349 1161 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 PDK3Q15120 406 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 POU4F3Q15319 338 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 ST3GAL2Q16842 350 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 CTU2Q2VPK5 515 aaKnown RBP8.25□□□□□ -1.09
ACTN1-218ENST00000556343 TMEM236Q5W0B7 351 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 ACSM5Q6NUN0 579 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 SLC35D2Q76EJ3 337 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 FCRLAQ7L513 359 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 ADCK1Q86TW2 530 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 MARVELD2Q8N4S9 558 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 OR8D4Q8NGM9 314 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 TMEM163Q8TC26 289 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 RFKQ969G6 155 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 INTS12Q96CB8 462 aaKnown RBP8.25□□□□□ -1.09
ACTN1-218ENST00000556343 ADAD1Q96M93 576 aaKnown RBP8.25□□□□□ -1.09
ACTN1-218ENST00000556343 RBP7Q96R05 134 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 SNX18Q96RF0 628 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 PLA2G12AQ9BZM1 189 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 PRDM14Q9GZV8 571 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 TSPAN10Q9H1Z9 355 aaPredicted RBP8.25□□□□□ -1.09
ACTN1-218ENST00000556343 CMC2Q9NRP2 79 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 GLRX2Q9NS18 164 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 PNPLA3Q9NST1 481 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 PARPBPQ9NWS1 579 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 LUZP4Q9P127 313 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 KLHL9Q9P2J3 617 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 SPRR3Q9UBC9 169 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 IL20RAQ9UHF4 553 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 ZNF346Q9UL40 294 aaKnown RBP8.25□□□□□ -1.09
ACTN1-218ENST00000556343 LIPGQ9Y5X9 500 aa8.25□□□□□ -1.09
ACTN1-218ENST00000556343 IRGMA1A4Y4 181 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 OR6C65A6NJZ3 312 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 SLC22A20A6NK97 555 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 PRR23D1E9PI22 279 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 E9PQ18 207 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 BHLHE40O14503 412 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 PRRG2O14669 202 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 SURF4O15260 269 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 CYTIPO60759 359 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 WDR1O75083 606 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 SERPINI2O75830 405 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 PLGP00747 810 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 PRR23D2P0DMB1 279 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 EDN3P14138 238 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 ABOP16442 354 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 GUCA1AP43080 201 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 CENPAP49450 140 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 CASP6P55212 293 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 POU3F1Q03052 451 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 TMED1Q13445 227 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 PON3Q15166 354 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 ACKR1Q16570 336 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 SLC25A30Q5SVS4 291 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 SLC35F1Q5T1Q4 408 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 OR2A2Q6IF42 318 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 DNM1P34Q6PK57 102 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 GFRALQ6UXV0 394 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 THSD4Q6ZMP0 1018 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 Q6ZPB1 254 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 IGFN1Q86VF2 1251 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 GID4Q8IVV7 300 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 CHERPQ8IWX8 916 aaKnown RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 FAM26EQ8N5C1 309 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms