RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CTU2Q2VPK5 515 aaKnown RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 EEF1A1P5Q5VTE0 462 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 C1QL3Q5VWW1 255 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF585AQ6P3V2 769 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 DNM1P34Q6PK57 102 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 TMEM99Q8N816 258 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 FNDC8Q8TC99 324 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 CPT1CQ8TCG5 803 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 ZPLD1Q8TCW7 415 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 SNRNP40Q96DI7 357 aaKnown RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 HRASLS5Q96KN8 279 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 ADAD1Q96M93 576 aaKnown RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 ERMAPQ96PL5 475 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 TNFRSF13CQ96RJ3 184 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 TRIB1Q96RU8 372 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 MBOAT4Q96T53 435 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 TM9SF2Q99805 663 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 SLX1AQ9BQ83 275 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 GRIP2Q9C0E4 1043 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 TP63Q9H3D4 680 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 PIEZO2Q9H5I5 2752 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 GLRX2Q9NS18 164 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 HSPE1-MOB4S4R3N1 261 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 MGAQ8IWI9 3026 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 DSPP15924 2871 aaKnown RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 ITPR1Q14643 2758 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 ZAR1LA6NP61 321 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 IMPA2O14732 288 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 SMAD9O15198 467 aaKnown RBP10.02□□□□□ -0.81
SHMT2-220ENST00000555634 EFNA2O43921 213 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 FZD7O75084 574 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 BCL10O95999 233 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 IGHMP01871 453 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 F13BP05160 661 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 GGT2P36268 569 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 AGFG1P52594 562 aaKnown RBP10.02□□□□□ -0.81
SHMT2-220ENST00000555634 PER3P56645 1201 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 CLRN1P58418 232 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 RPL27P61353 136 aaKnown RBP10.02□□□□□ -0.81
SHMT2-220ENST00000555634 LSM11P83369 360 aaKnown RBP eCLIP10.02□□□□□ -0.81
SHMT2-220ENST00000555634 RASGEF1BQ0VAM2 473 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 ZP4Q12836 540 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 POU4F3Q15319 338 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 SNAPC1Q16533 368 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 C3AR1Q16581 482 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 GXYLT1Q4G148 440 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 TMEM201Q5SNT2 666 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 C6orf52Q5T4I8 152 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 SLX4IPQ5VYV7 408 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 ABLIM2Q6H8Q1 611 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 PTCHD4Q6ZW05 846 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 CD163Q86VB7 1156 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 IGFN1Q86VF2 1251 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 FAM57AQ8TBR7 257 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 RNF128Q8TEB7 428 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 RFKQ969G6 155 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 OTULINQ96BN8 352 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 WDYHV1Q96HA8 205 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 ADGRG7Q96K78 797 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 Q96MT0 163 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 ZFP3Q96NJ6 502 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 PITX2Q99697 317 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 SRXN1Q9BYN0 137 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 TXNIPQ9H3M7 391 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 GP6Q9HCN6 339 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 B3GAT2Q9NPZ5 323 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 ASF1BQ9NVP2 202 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 PARPBPQ9NWS1 579 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 FAM118AQ9NWS6 357 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 H2AFY2Q9P0M6 372 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-220ENST00000555634 REV1Q9UBZ9 1251 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 IL20RAQ9UHF4 553 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 BLOC1S6Q9UL45 172 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 EMC9Q9Y3B6 208 aa10.02□□□□□ -0.81
SHMT2-220ENST00000555634 GTF3C1Q12789 2109 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 PHF3Q92576 2039 aaKnown RBP10.01□□□□□ -0.81
SHMT2-220ENST00000555634 SVILO95425 2214 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 LOC400499M0QZD8 3231 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 IGHV3-15A0A0B4J1V0 119 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 LOC102725191A0A1B0GVB3 256 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 OR6C65A6NJZ3 312 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 ARPC3O15145 178 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 SLC16A6O15403 523 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 CYTIPO60759 359 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 SLC19A2O60779 497 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 KRT33AO76009 404 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 IGHG1P01857 330 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 ACVR2AP27037 513 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 GIPRP48546 466 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 PCYT1AP49585 367 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 TDGF1P3P51864 188 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 SUCLG1P53597 346 aaKnown RBP10.01□□□□□ -0.81
SHMT2-220ENST00000555634 LGALS3BPQ08380 585 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 C19orf57Q0VDD7 668 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 C1orf185Q5T7R7 199 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 MEDAGQ5VYS4 303 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 ZNF324BQ6AW86 544 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-220ENST00000555634 SLC35D2Q76EJ3 337 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 KIF18BQ86Y91 864 aa10.01□□□□□ -0.81
SHMT2-220ENST00000555634 GID4Q8IVV7 300 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms