RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 SLC38A2Q96QD8 506 aa12.06□□□□□ -0.48
PCNX4-209ENST00000555569 WFDC6Q9BQY6 131 aa12.06□□□□□ -0.48
PCNX4-209ENST00000555569 MOKQ9UQ07 419 aa12.06□□□□□ -0.48
PCNX4-209ENST00000555569 A0A096LPE4 126 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 ARPC4-TTLL3A0A0A6YYG9 625 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 IGHV1-18A0A0C4DH31 117 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 LOC102725191A0A1B0GVB3 256 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 A0A1W2PPZ6 126 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 ATP6V1G2-DDX39BF2Z307 99 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 M0QX08 132 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 M0R3H8 397 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 SSX4O60224 188 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 SASH3O75995 380 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 BGLAPP02818 100 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 OPN1SWP03999 348 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 NQO1P15559 274 aaKnown RBP12.05□□□□□ -0.48
PCNX4-209ENST00000555569 APOBEC3AP31941 199 aaPredicted RBP12.05□□□□□ -0.48
PCNX4-209ENST00000555569 NUDT6P53370 316 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 CDH12P55289 794 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 RAB35Q15286 201 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 SWT1Q5T5J6 900 aaKnown RBP12.05□□□□□ -0.48
PCNX4-209ENST00000555569 METTL21CQ5VZV1 264 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 ANKRD16Q6P6B7 361 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 SLC30A8Q8IWU4 369 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 GPR137CQ8N3F9 429 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 MCHR1Q99705 422 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 ARHGDIGQ99819 225 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 KCNS3Q9BQ31 491 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 TMEM43Q9BTV4 400 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 ASPNQ9BXN1 380 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 NELFAQ9H3P2 528 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 GPR35Q9HC97 309 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 CORINQ9Y5Q5 1042 aa12.05□□□□□ -0.48
PCNX4-209ENST00000555569 CHD3Q12873 2000 aaKnown RBP12.04□□□□□ -0.48
PCNX4-209ENST00000555569 INAFM1C9JVW0 142 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 MS4A18H0YCH9 400 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 RPL36A-HNRNPH2H7BZ11 118 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 TRAF3IP2O43734 574 aaPredicted RBP12.04□□□□□ -0.48
PCNX4-209ENST00000555569 FMO6PO60774 539 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 C8BP07358 591 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 HOXB1P14653 301 aaPredicted RBP12.04□□□□□ -0.48
PCNX4-209ENST00000555569 PCGF2P35227 344 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 TUBA1BP68363 451 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 TUBA4AP68366 448 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 ARF1P84077 181 aaKnown RBP12.04□□□□□ -0.48
PCNX4-209ENST00000555569 CHRNB3Q05901 458 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 KRTAP1-1Q07627 177 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 DUSP7Q16829 419 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 MS4A18Q3C1V0 323 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 C3orf36Q3SXR2 165 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 ZNF613Q6PF04 617 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 TUBA1AQ71U36 451 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 PATL1Q86TB9 770 aaKnown RBP12.04□□□□□ -0.48
PCNX4-209ENST00000555569 UEVLDQ8IX04 471 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 SCAIQ8N9R8 606 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 PIK3C3Q8NEB9 887 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 ANKK1Q8NFD2 765 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 GPR32P1Q8NGA4 272 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 OR10A6Q8NH74 314 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 SLC41A3Q96GZ6 507 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 OR2M2Q96R28 347 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 RHNO1Q9BSD3 238 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 KATNB1Q9BVA0 655 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 TMEM120AQ9BXJ8 343 aa12.04□□□□□ -0.48
PCNX4-209ENST00000555569 KAT8Q9H7Z6 458 aaKnown RBP12.04□□□□□ -0.48
PCNX4-209ENST00000555569 CRNNQ9UBG3 495 aaPredicted RBP12.04□□□□□ -0.48
PCNX4-209ENST00000555569 H7C417 338 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 HPRP00739 348 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 BMP4P12644 408 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 DSCR9P59020 149 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 PMS2P3Q13401 168 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 NPTX1Q15818 432 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 CEACAM16Q2WEN9 425 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 INTS11Q5TA45 600 aaKnown RBP12.03□□□□□ -0.48
PCNX4-209ENST00000555569 CLEC2AQ6UVW9 174 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 TMEM123Q8N131 208 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 C10orf53Q8N6V4 93 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 OR6T1Q8NGN1 323 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 MOGAT1Q96PD6 335 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 CRLF2Q9HC73 371 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 MOV10Q9HCE1 1003 aaKnown RBP12.03□□□□□ -0.48
PCNX4-209ENST00000555569 MRPL39Q9NYK5 338 aaKnown RBP12.03□□□□□ -0.48
PCNX4-209ENST00000555569 PMF1-BGLAPU3KQ54 211 aa12.03□□□□□ -0.48
PCNX4-209ENST00000555569 YLPM1P49750 1951 aaKnown RBP12.03□□□□□ -0.48
PCNX4-209ENST00000555569 IGHV4-30-2A0A087WSY4 118 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 CPSF4LA6NMK7 179 aaKnown RBP12.02□□□□□ -0.49
PCNX4-209ENST00000555569 LRRN3E7EW58 273 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 FBP2O00757 339 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 CHP2O43745 196 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 IGLV1-44P01699 117 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 CRYAAP02489 173 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 TP53P04637 393 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-209ENST00000555569 CECR9P0C854 216 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 TROVE2P10155 538 aaKnown RBP eCLIP12.02□□□□□ -0.49
PCNX4-209ENST00000555569 HLA-DOBP13765 273 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 CD247P20963 164 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 GZMMP51124 257 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 NAAAQ02083 359 aa12.02□□□□□ -0.49
PCNX4-209ENST00000555569 POU3F1Q03052 451 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-209ENST00000555569 PUDPQ08623 228 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms