RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 LHX6Q9UPM6 363 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 B3GNT3Q9Y2A9 372 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 CORINQ9Y5Q5 1042 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 TEX13CA0A0J9YWL9 993 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 GJE1A6NN92 205 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 NPIPA5E9PKD4 350 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 CXCL13O43927 109 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 ENTPD6O75354 484 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 PMS2P2O95744 297 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 HMGN1P05114 100 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 CD14P08571 375 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 ENPP1P22413 925 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 EIF1AXP47813 144 aaKnown RBP9.14□□□□□ -0.95
SRP54-208ENST00000555557 P2RY4P51582 365 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 SH3BGRP55822 239 aaPredicted RBP9.14□□□□□ -0.95
SRP54-208ENST00000555557 CARD18P57730 90 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 PUDPQ08623 228 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 MFSD13AQ14CX5 517 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 C3AR1Q16581 482 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 HBMQ6B0K9 141 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 FAM122BQ7Z309 247 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 GPAT4Q86UL3 456 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 CYB561A3Q8NBI2 242 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 SDR9C7Q8NEX9 313 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 BBS1Q8NFJ9 593 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 OR52E2Q8NGJ4 325 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 OR10D3Q8NH80 312 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 NEIL3Q8TAT5 605 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 TMEM163Q8TC26 289 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 ABTB1Q969K4 478 aaPredicted RBP9.14□□□□□ -0.95
SRP54-208ENST00000555557 ZNF845Q96IR2 970 aaPredicted RBP9.14□□□□□ -0.95
SRP54-208ENST00000555557 PLEKHA8Q96JA3 519 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 ADGRG7Q96K78 797 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 LRR1Q96L50 414 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 TSPAN32Q96QS1 320 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 UCN2Q96RP3 112 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 GPX7Q96SL4 187 aaPredicted RBP9.14□□□□□ -0.95
SRP54-208ENST00000555557 TEX12Q9BXU0 123 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 MED20Q9H944 212 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 VCX3AQ9NNX9 186 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 INIPQ9NRY2 104 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 QPCTLQ9NXS2 382 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 ZNF346Q9UL40 294 aaKnown RBP9.14□□□□□ -0.95
SRP54-208ENST00000555557 NPIPA1Q9UND3 350 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 TRAPPC4Q9Y296 219 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 PCDHGB7Q9Y5F8 929 aa9.14□□□□□ -0.95
SRP54-208ENST00000555557 TRGV5A0A0B4J1U4 118 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 PTGES3LE9PB15 166 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 GRK5P34947 590 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 CDH15P55291 814 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 CLDN18P56856 261 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 SNRPGP62308 76 aaKnown RBP9.13□□□□□ -0.95
SRP54-208ENST00000555557 SLC35A1P78382 337 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 PIGFQ07326 219 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 CRMP1Q14194 572 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 MELKQ14680 651 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 ACKR1Q16570 336 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 ANKDD1AQ495B1 522 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 TMEM225Q6GV28 225 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 PLBD1Q6P4A8 553 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 ESPNLQ6ZVH7 1005 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 CPOQ8IVL8 374 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 WDFY1Q8IWB7 410 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 FAM26EQ8N5C1 309 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 SCAIQ8N9R8 606 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 LSM14AQ8ND56 463 aaKnown RBP9.13□□□□□ -0.95
SRP54-208ENST00000555557 ZPLD1Q8TCW7 415 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 TRUB1Q8WWH5 349 aaKnown RBP9.13□□□□□ -0.95
SRP54-208ENST00000555557 TXNDC15Q96J42 360 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 NMNAT3Q96T66 252 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 HCAR1Q9BXC0 346 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 HINT3Q9NQE9 182 aaKnown RBP9.13□□□□□ -0.95
SRP54-208ENST00000555557 CMC2Q9NRP2 79 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 KLHL13Q9P2N7 655 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 B3GAT1Q9P2W7 334 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 SPRR3Q9UBC9 169 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 GRHPRQ9UBQ7 328 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 RALYQ9UKM9 306 aaKnown RBP9.13□□□□□ -0.95
SRP54-208ENST00000555557 B3GALT5Q9Y2C3 310 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 MYRFQ9Y2G1 1151 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 DNAJC13O75165 2243 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 PIEZO2Q9H5I5 2752 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 H7C1C5 153 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 LINC01387J3KSC0 135 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 SLC1A7O00341 560 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 ARPC3O15145 178 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 MPZL2O60487 215 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 CLUP10909 449 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 CRHBPP24387 322 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 CDKN2AP42771 156 aaKnown RBP9.13□□□□□ -0.95
SRP54-208ENST00000555557 LCN6P62502 163 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 CSNK2A1P68400 391 aaPredicted RBP9.13□□□□□ -0.95
SRP54-208ENST00000555557 H3F3AP84243 136 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 HSF1Q00613 529 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 POU3F1Q03052 451 aaPredicted RBP9.13□□□□□ -0.95
SRP54-208ENST00000555557 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.13□□□□□ -0.95
SRP54-208ENST00000555557 ZP4Q12836 540 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 ITGADQ13349 1161 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 VASNQ6EMK4 673 aa9.13□□□□□ -0.95
SRP54-208ENST00000555557 PAQR6Q6TCH4 344 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms