RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SLC7A10Q9NS82 523 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 ST6GALNAC2Q9UJ37 374 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 MAGEL2Q9UJ55 1249 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 ZNF229Q9UJW7 825 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 SAMD4AQ9UPU9 718 aaKnown RBP10.67□□□□□ -0.7
SRP54-206ENST00000555317 PLEKHA6Q9Y2H5 1048 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 MED31Q9Y3C7 131 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 FAM32AQ9Y421 112 aaKnown RBP10.67□□□□□ -0.7
SRP54-206ENST00000555317 ALPK2Q86TB3 2170 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 CELSR1Q9NYQ6 3014 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 OR5H1A6NKK0 313 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 ZNF726A6NNF4 738 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 C11orf98E9PRG8 122 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 CLOCKO15516 846 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 RNF13O43567 381 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 FZD7O75084 574 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 LYPD3O95274 346 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 MT-ND1P03886 318 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 RAF1P04049 648 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 THY1P04216 161 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 CD3EP07766 207 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 NTF4P34130 210 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 ZNF74Q16587 644 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 KLHL17Q6TDP4 642 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 PAMR1Q6UXH9 720 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 C22orf34Q6ZV56 151 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 FITM2Q8N6M3 262 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 PIK3C3Q8NEB9 887 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 C1orf162Q8NEQ5 155 aaPredicted RBP10.66□□□□□ -0.7
SRP54-206ENST00000555317 ANKK1Q8NFD2 765 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 OR52N5Q8NH56 324 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 TMEM255BQ8WV15 326 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 SGTBQ96EQ0 304 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 NSL1Q96IY1 281 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 CDRT15Q96T59 188 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 B3GAT1Q9P2W7 334 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 AKAP9Q99996 3911 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 HEATR1Q9H583 2144 aaKnown RBP10.66□□□□□ -0.7
SRP54-206ENST00000555317 PLCE1Q9P212 2302 aa10.66□□□□□ -0.7
SRP54-206ENST00000555317 ARID1AO14497 2285 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 ITPR3Q14573 2671 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 LOC102725191A0A1B0GVB3 256 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 B2RBV5 119 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 LRRN3E7EW58 273 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 PLPP3O14495 311 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 SIAH2O43255 324 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 KLF4O43474 513 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 TRAF3IP2O43734 574 aaPredicted RBP10.65□□□□□ -0.7
SRP54-206ENST00000555317 WNT11O96014 354 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 ITGA5P08648 1049 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 HSD17B1P14061 328 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 CALB2P22676 271 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 YAP1P46937 504 aaKnown RBP10.65□□□□□ -0.7
SRP54-206ENST00000555317 SH3BGRP55822 239 aaPredicted RBP10.65□□□□□ -0.7
SRP54-206ENST00000555317 LTBQ06643 244 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 TRAM2Q15035 370 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 SPATS1Q496A3 300 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 CARD17Q5XLA6 110 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 ZNF704Q6ZNC4 412 aaPredicted RBP10.65□□□□□ -0.7
SRP54-206ENST00000555317 RRM2BQ7LG56 351 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 PXKQ7Z7A4 578 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 TSPYL5Q86VY4 417 aaPredicted RBP10.65□□□□□ -0.7
SRP54-206ENST00000555317 NKAIN4Q8IVV8 208 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 OFCC1Q8IZS5 231 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 C17orf78Q8N4C9 275 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 FAM156AQ8NDB6 213 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 PFN4Q8NHR9 129 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 BCAS4Q8TDM0 211 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 MCUR1Q96AQ8 359 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 ZNF426Q9BUY5 554 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 AMBRA1Q9C0C7 1298 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 PLEKHF2Q9H8W4 249 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 FAM53CQ9NYF3 392 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 AMDHD2Q9Y303 409 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 RNF115Q9Y4L5 304 aa10.65□□□□□ -0.7
SRP54-206ENST00000555317 MAGED1Q9Y5V3 778 aaPredicted RBP10.65□□□□□ -0.7
SRP54-206ENST00000555317 DSCAMO60469 2012 aa10.65□□□□□ -0.71
SRP54-206ENST00000555317 A0A1W2PRG6 482 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 MCIDASD6RGH6 385 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 MS4A18H0YCH9 400 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 BLOC1S5-TXNDC5H3BN57 136 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 PDLIM1O00151 329 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 OR7A10O76100 309 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 HPRP00739 348 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 ITGA2P17301 1181 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 ART1P52961 327 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 UGT2B15P54855 530 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 UBE2NP61088 152 aaKnown RBP10.64□□□□□ -0.71
SRP54-206ENST00000555317 ROR2Q01974 943 aaKnown RBP10.64□□□□□ -0.71
SRP54-206ENST00000555317 GABRA6Q16445 453 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 MS4A18Q3C1V0 323 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 TMEM108Q6UXF1 575 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 ZNF730Q6ZMV8 503 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 C20orf204Q6ZNR8 217 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 HDDC2Q7Z4H3 204 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 CDK20Q8IZL9 346 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 OR6N1Q8NGY5 312 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 ADAD1Q96M93 576 aaKnown RBP10.64□□□□□ -0.71
SRP54-206ENST00000555317 NSMCE2Q96MF7 247 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 HS3ST6Q96QI5 342 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms