RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CREB3L2Q70SY1 520 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 TMEM179BQ7Z7N9 219 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 MRGPRGQ86SM5 289 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 MEX3DQ86XN8 651 aaKnown RBP12.7□□□□□ -0.38
CHD8-208ENST00000555301 ZDHHC13Q8IUH4 622 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 CCDC71Q8IV32 467 aaPredicted RBP12.7□□□□□ -0.38
CHD8-208ENST00000555301 SVOPLQ8N434 492 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 ZNF808Q8N4W9 903 aaPredicted RBP12.7□□□□□ -0.38
CHD8-208ENST00000555301 FAM26EQ8N5C1 309 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 OR13C2Q8NGS9 318 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 TMEM45BQ96B21 275 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 SDCCAG3Q96C92 435 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 TNFRSF13CQ96RJ3 184 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 FEVQ99581 238 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 GPA33Q99795 319 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 PKP2Q99959 881 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 SEMA6AQ9H2E6 1030 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 PIGMQ9H3S5 423 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 ZNF556Q9HAH1 456 aa12.7□□□□□ -0.38
CHD8-208ENST00000555301 NOSIPQ9Y314 301 aaKnown RBP12.7□□□□□ -0.38
CHD8-208ENST00000555301 TRAV27A0A087WT01 109 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 C11orf98E9PRG8 122 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 G3V2T6 193 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 H0YHG0 523 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 ZG16O60844 167 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 PTP4A3O75365 173 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 MRPL33O75394 65 aaKnown RBP12.69□□□□□ -0.38
CHD8-208ENST00000555301 NDUFB2O95178 105 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 HPRP00739 348 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 CD8BP10966 210 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 ELF3P78545 371 aaPredicted RBP12.69□□□□□ -0.38
CHD8-208ENST00000555301 POU3F1Q03052 451 aaPredicted RBP12.69□□□□□ -0.38
CHD8-208ENST00000555301 SLC25A35Q3KQZ1 300 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 VWA1Q6PCB0 445 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 EPHX4Q8IUS5 362 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 PQLC1Q8N2U9 271 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 CA5BP1Q8WTZ4 195 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 DNAJC9Q8WXX5 260 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 ZNF775Q96BV0 537 aaPredicted RBP12.69□□□□□ -0.38
CHD8-208ENST00000555301 STARD4Q96DR4 205 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 INIPQ9NRY2 104 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 PROCRQ9UNN8 238 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 RCE1Q9Y256 329 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 SIGLEC7Q9Y286 467 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 RELNP78509 3460 aa12.69□□□□□ -0.38
CHD8-208ENST00000555301 A0A1W2PRG6 482 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 NPIPB13A6NJU9 1138 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 NPIPB4C9JG80 1138 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 TRAF3IP2O43734 574 aaPredicted RBP12.68□□□□□ -0.38
CHD8-208ENST00000555301 BAG2O95816 211 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 POU2F1P14859 743 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 DAP3P51398 398 aaKnown RBP12.68□□□□□ -0.38
CHD8-208ENST00000555301 FHL1Q13642 323 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 RPL13AP3Q6NVV1 102 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 SMARCD3Q6STE5 483 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 CD300LDQ6UXZ3 194 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 RASSF6Q6ZTQ3 369 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 AAED1Q7RTV5 226 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 NUFIP2Q7Z417 695 aaKnown RBP12.68□□□□□ -0.38
CHD8-208ENST00000555301 BTLAQ7Z6A9 289 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 STK32CQ86UX6 486 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 HS3ST5Q8IZT8 346 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 ZIC4Q8N9L1 334 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 ATG16L2Q8NAA4 619 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 ICA1LQ8NDH6 482 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 LILRB4Q8NHJ6 448 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 MOSPD2Q8NHP6 518 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 FANK1Q8TC84 345 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 ITLN2Q8WWU7 325 aaPredicted RBP12.68□□□□□ -0.38
CHD8-208ENST00000555301 GTPBP3Q969Y2 492 aaKnown RBP12.68□□□□□ -0.38
CHD8-208ENST00000555301 ZNF385AQ96PM9 386 aaKnown RBP12.68□□□□□ -0.38
CHD8-208ENST00000555301 NIPSNAP1Q9BPW8 284 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 OSBPL10Q9BXB5 764 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 MCCC2Q9HCC0 563 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 PLSCR4Q9NRQ2 329 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 KIF17Q9P2E2 1029 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 OAZ3Q9UMX2 235 aa12.68□□□□□ -0.38
CHD8-208ENST00000555301 WIPF3A6NGB9 483 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 OR6C65A6NJZ3 312 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 MSTNO14793 375 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 SERPINI2O75830 405 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 SMNDC1O75940 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHD8-208ENST00000555301 BCL10O95999 233 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 CGAP01215 116 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 F13BP05160 661 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 HLA-DOBP13765 273 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 IFNGR1P15260 489 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 PRKACGP22612 351 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 RPL4P36578 427 aaKnown RBP12.67□□□□□ -0.38
CHD8-208ENST00000555301 OR3A2P47893 321 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 CLDN17P56750 224 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 RCN1Q15293 331 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 RFX4Q33E94 735 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 CASP12Q6UXS9 341 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 NHLRC1Q6VVB1 395 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 ZNF620Q6ZNG0 422 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 SLC35D2Q76EJ3 337 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 HDDC2Q7Z4H3 204 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 LIX1LQ8IVB5 337 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 ZNF100Q8IYN0 542 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms