RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ACVR1CQ8NER5 493 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 THAP7Q9BT49 309 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-216ENST00000555002 PLK3Q9H4B4 646 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 EPHX3Q9H6B9 360 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 PRSS38A1L453 326 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 RNASEK-C17orf49H0YIS7 233 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 SELPLGQ14242 412 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 GALEQ14376 348 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TRILQ7L0X0 811 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ANKRD13BQ86YJ7 626 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 FBXL16Q8N461 479 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF587Q96SQ5 575 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-216ENST00000555002 APOOQ9BUR5 198 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 URGCP-MRPS24S4R325 110 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 IFT172Q9UG01 1749 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 MROH6A6NGR9 719 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 STC2O76061 302 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 S1PR4O95977 384 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 IMPA1P29218 277 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TAGLN2P37802 199 aaKnown RBP6.41□□□□□ -1.38
SYNE2-216ENST00000555002 GABARAPL2P60520 117 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 GPR85P60893 370 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 RTL6Q6ICC9 239 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 LINC00346Q8IVM7 164 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 CNTN4Q8IWV2 1026 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 SIMC1Q8NDZ2 872 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 CPEB3Q8NE35 698 aaKnown RBP6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ADAMTS19Q8TE59 1207 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 DUSP19Q8WTR2 217 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ZUFSPQ96AP4 578 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 FCRL3Q96P31 734 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ISYNA1Q9NPH2 558 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF835Q9Y2P0 537 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 MST1RQ04912 1400 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TRGV8A0A0C4DH27 118 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 FRMD1Q8N878 549 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM239Q8WW34 195 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 CCDC74AQ96AQ1 378 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 PARP12Q9H0J9 701 aaKnown RBP6.41□□□□□ -1.38
SYNE2-216ENST00000555002 DDX31Q9H8H2 851 aaKnown RBP6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TEX264Q9Y6I9 313 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 RIPPLY1Q0D2K3 151 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 LTB4RQ15722 352 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 PDZD11Q5EBL8 140 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 CPEB2Q7Z5Q1 589 aaKnown RBP6.4□□□□□ -1.38
SYNE2-216ENST00000555002 OR2M3Q8NG83 312 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 TECTBQ96PL2 329 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 C1orf123Q9NWV4 160 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 ARFGEF2Q9Y6D5 1785 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 PARP4Q9UKK3 1724 aaKnown RBP6.4□□□□□ -1.38
SYNE2-216ENST00000555002 LMTK2Q8IWU2 1503 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 GPR176Q14439 515 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 PSAPL1Q6NUJ1 521 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 SSX7Q7RTT5 188 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 CDC20BQ86Y33 519 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 AGBL5Q8NDL9 886 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 MOB3AQ96BX8 217 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 IER2Q9BTL4 223 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 MAGIXQ9H6Y5 334 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 SLC22A23A1A5C7 686 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF785A8K8V0 405 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 PENKP01210 267 aaPredicted RBP6.4□□□□□ -1.38
SYNE2-216ENST00000555002 F13BP05160 661 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 BLVRBP30043 206 aaPredicted RBP6.4□□□□□ -1.38
SYNE2-216ENST00000555002 BMPR1AP36894 532 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 GMPRP36959 345 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 SNTB1Q13884 538 aaKnown RBP6.4□□□□□ -1.38
SYNE2-216ENST00000555002 PNCKQ6P2M8 343 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 CD300LGQ6UXG3 332 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 GPRIN1Q7Z2K8 1008 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 SYT9Q86SS6 491 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 THNSL2Q86YJ6 484 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 NAGSQ8N159 534 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 PQLC3Q8N755 202 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 RAB3CQ96E17 227 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 C20orf24Q9BUV8 137 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 POPDC3Q9HBV1 291 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 PTTG3PQ9NZH4 202 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 RASD1Q9Y272 281 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 GALR3O60755 368 aaPredicted RBP6.4□□□□□ -1.38
SYNE2-216ENST00000555002 CYTIPO60759 359 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 GPR32O75388 356 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 MNX1P50219 401 aaPredicted RBP6.4□□□□□ -1.38
SYNE2-216ENST00000555002 OR1Q1Q15612 314 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 DEFB109BQ30KR1 87 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 IQCKQ8N0W5 287 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 DEFB108BQ8NET1 73 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 LGALS12Q96DT0 336 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 APIPQ96GX9 242 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 MBOAT4Q96T53 435 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 NXT1Q9UKK6 140 aaKnown RBP6.4□□□□□ -1.38
SYNE2-216ENST00000555002 MYO7BQ6PIF6 2116 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 RALGAPA1Q6GYQ0 2036 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 PCGF2P35227 344 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 SIRT6Q8N6T7 355 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 SLC39A7Q92504 469 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 OR8B4Q96RC9 309 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 ARPC5LQ9BPX5 153 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 THSD1Q9NS62 852 aa6.4□□□□□ -1.38
SYNE2-216ENST00000555002 VAPAQ9P0L0 249 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms