RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 C11orf87Q6NUJ2 197 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 OR10H4Q8NGA5 316 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 C1orf216Q8TAB5 229 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 DERL3Q96Q80 235 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 OCSTAMPQ9BR26 566 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 TEX101Q9BY14 249 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 SEC61A2Q9H9S3 476 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 RNF222A6NCQ9 220 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 GGT3PA6NGU5 568 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 OR2AT4A6NND4 320 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 BLOC1S5-TXNDC5H3BN57 136 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 CCL16O15467 120 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 SPINT1O43278 529 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 ADH1CP00326 375 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 CPT2P23786 658 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 DLSTP36957 453 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 ADH7P40394 386 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 CASP6P55212 293 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 NDUFAF6Q330K2 333 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 C4orf46Q504U0 113 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 PLBD1Q6P4A8 553 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 C17orf64Q86WR6 236 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 OR6N1Q8NGY5 312 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 S100A16Q96FQ6 103 aaKnown RBP14.35□□□□□ -0.11
SYNE3-203ENST00000554873 FAM46AQ96IP4 442 aaKnown RBP14.35□□□□□ -0.11
SYNE3-203ENST00000554873 FAM183AA6NL82 134 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 MAN2B1O00754 1011 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 NT5EP21589 574 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 PTGER1P34995 402 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 GPR1P46091 355 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 TMEM244Q5VVB8 128 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 RNF141Q8WVD5 230 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 CPNE2Q96FN4 548 aaPredicted RBP14.35□□□□□ -0.11
SYNE3-203ENST00000554873 SLC35G5Q96KT7 338 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 C2orf88Q9BSF0 95 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 ZCCHC2Q9C0B9 1178 aaKnown RBP14.35□□□□□ -0.11
SYNE3-203ENST00000554873 DPEP2Q9H4A9 486 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 TMEM27Q9HBJ8 222 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 MRPS30Q9NP92 439 aaKnown RBP14.35□□□□□ -0.11
SYNE3-203ENST00000554873 SEMA4GQ9NTN9 838 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 ZNF230Q9UIE0 474 aaPredicted RBP14.35□□□□□ -0.11
SYNE3-203ENST00000554873 ZMIZ1Q9ULJ6 1067 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 FOXJ3Q9UPW0 622 aa14.35□□□□□ -0.11
SYNE3-203ENST00000554873 TCF20Q9UGU0 1960 aaKnown RBP14.35□□□□□ -0.11
SYNE3-203ENST00000554873 A0A0G2JN53 185 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 URADA6NGE7 173 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 COX5BP10606 129 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 AVPR2P30518 371 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 RPTNQ6XPR3 784 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 SSX6Q7RTT6 188 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 UBE3DQ7Z6J8 389 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 LRRTM1Q86UE6 522 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 OR2L2Q8NH16 312 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 C15orf40Q8WUR7 153 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 C4orf36Q96KX1 117 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 OR52A5Q9H2C5 316 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 GLIPR2Q9H4G4 154 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 ABT1Q9ULW3 272 aaKnown RBP14.34□□□□□ -0.11
SYNE3-203ENST00000554873 CBY1Q9Y3M2 126 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 MYO10Q9HD67 2058 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 LRRK1Q38SD2 2015 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 NUP210Q8TEM1 1887 aaPredicted RBP14.34□□□□□ -0.11
SYNE3-203ENST00000554873 H7BY64 318 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 J3QLW9 94 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 TCAPO15273 167 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 EMC8O43402 210 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 NTN1O95631 604 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 IFNA10P01566 189 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 RHOP08100 348 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 CHRM4P08173 479 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 ZNF19P17023 458 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 BUD31P41223 144 aaPredicted RBP14.34□□□□□ -0.11
SYNE3-203ENST00000554873 KCNAB1Q14722 419 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 MEPCEQ7L2J0 689 aaKnown RBP14.34□□□□□ -0.11
SYNE3-203ENST00000554873 SDR9C7Q8NEX9 313 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 DUSP19Q8WTR2 217 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 SNX33Q8WV41 574 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 MARS2Q96GW9 593 aaKnown RBP14.34□□□□□ -0.11
SYNE3-203ENST00000554873 LINC00615Q96LM1 132 aaPredicted RBP14.34□□□□□ -0.11
SYNE3-203ENST00000554873 PRAP1Q96NZ9 151 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 TAAR9Q96RI9 348 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 AIF1LQ9BQI0 150 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 APMAPQ9HDC9 416 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 MEPEQ9NQ76 525 aaPredicted RBP14.34□□□□□ -0.11
SYNE3-203ENST00000554873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.34□□□□□ -0.11
SYNE3-203ENST00000554873 COMMD9Q9P000 198 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 ZNF337Q9Y3M9 751 aa14.34□□□□□ -0.11
SYNE3-203ENST00000554873 PTHLHP12272 177 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 DPP4P27487 766 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 PSMB5P28074 263 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 CASRP41180 1078 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 PRKAG1P54619 331 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 POU4F2Q12837 409 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 NCMAPQ5T1S8 102 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 NIPAL3Q6P499 406 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 LILRA6Q6PI73 481 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 FCRLAQ7L513 359 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 C11orf96Q7Z7L8 435 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 MESP1Q9BRJ9 268 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 LAT2Q9GZY6 243 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms