RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 CHDHQ8NE62 594 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 OR10G2Q8NGC3 310 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 OR6C4Q8NGE1 309 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 OR52J3Q8NH60 311 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 NR4A3Q92570 626 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ERGIC1Q969X5 290 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 DGCR14Q96DF8 476 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 OTUB1Q96FW1 271 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 STACQ99469 402 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 APOL4Q9BPW4 351 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 RBM38Q9H0Z9 239 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 PIGUQ9H490 435 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 RIBC2Q9H4K1 309 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 TRIM45Q9H8W5 580 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 MTHFD2LQ9H903 347 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZNF556Q9HAH1 456 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 NMNAT1Q9HAN9 279 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SOHLH2Q9NX45 425 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 NLGN3Q9NZ94 848 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 MAT2BQ9NZL9 334 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 PILRBQ9UKJ0 227 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 GMPPBQ9Y5P6 360 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 KCNE3Q9Y6H6 103 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 KIF26BQ2KJY2 2108 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 A0A0C4DFX4 3053 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 EME2A4GXA9 379 aaPredicted RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 A6NL46 340 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 STMND1H3BQB6 276 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 SLC1A7O00341 560 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 CLDN4O14493 209 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 TOX3O15405 576 aaPredicted RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZNF749O43361 778 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 CTNSO60931 367 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 UGT2B17O75795 530 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 CCNB2O95067 398 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 EPPINO95925 133 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 AK1P00568 194 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ALPPP05187 535 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 H1F0P07305 194 aaKnown RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 GUSBP08236 651 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 CYC1P08574 325 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ACP2P11117 423 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 CBLP22681 906 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ELAVL4P26378 380 aaKnown RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 EPHA2P29317 976 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 DHPSP49366 369 aaPredicted RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 HSD17B7P56937 341 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 NUP107P57740 925 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 OR1D5P58170 312 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 KRTAP10-2P60368 255 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 RPP38P78345 283 aaKnown RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 BNC1Q01954 994 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ID2Q02363 134 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 BIKQ13323 160 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 GANABQ14697 944 aaKnown RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 DUSP5Q16690 384 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 CTU2Q2VPK5 515 aaKnown RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZNF311Q5JNZ3 666 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 MLIPQ5VWP3 458 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 NKAIN2Q5VXU1 208 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 LAIR2Q6ISS4 152 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZNF773Q6PK81 442 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 DHRS4L2Q6PKH6 230 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 DEF8Q6ZN54 512 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 FRRS1Q6ZNA5 592 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 PRSS42Q7Z5A4 293 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 COMTD1Q86VU5 262 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 LINC00471Q8N535 108 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 SEMA6DQ8NFY4 1073 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 OR4D11Q8NGI4 311 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 OR6T1Q8NGN1 323 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 PTPMT1Q8WUK0 201 aaPredicted RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 CDS1Q92903 461 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZNF578Q96N58 590 aaPredicted RBP4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 SDF2Q99470 211 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZNF350Q9GZX5 532 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ADNPQ9H2P0 1102 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 PIGMQ9H3S5 423 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 PCNX3Q9H6A9 2034 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 CXorf21Q9HAI6 301 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 ADAP2Q9NPF8 381 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 POLE3Q9NRF9 147 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 SELENONQ9NZV5 590 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 TMCC3Q9ULS5 477 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 IFT52Q9Y366 437 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 WDR45Q9Y484 360 aa4.28□□□□□ -1.72
PPP4R3A-204ENST00000554574 TTC28Q96AY4 2481 aa4.28□□□□□ -1.73
PPP4R3A-204ENST00000554574 LOC100509620A0A075B734 347 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 TRBV4-1A0A0J9YWV2 114 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 A0A1B0GTQ1 180 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 SH3PXD2BA1X283 911 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 FAAHO00519 579 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 YKT6O15498 198 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 B4GAT1O43505 415 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 KIAA0513O60268 411 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 OR10H2O60403 315 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 FCMRO60667 390 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 STX11O75558 287 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 OR2B3O76000 313 aa4.27□□□□□ -1.73
PPP4R3A-204ENST00000554574 OR6B1O95007 311 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms