RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 NRF1Q16656 503 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 DUSP7Q16829 419 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 PGGHGQ32M88 737 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 C9orf135Q5VTT2 229 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 AGAP6Q5VW22 663 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 NIPAL3Q6P499 406 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 ZNF613Q6PF04 617 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 SLC22A25Q6T423 547 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 KLHL24Q6TFL4 600 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 C16orf89Q6UX73 402 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 H1FNTQ75WM6 255 aaPredicted RBP7.65□□□□□ -1.18
ACTN1-213ENST00000554508 CCDC80Q76M96 950 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 DTX2Q86UW9 622 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 COMTD1Q86VU5 262 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 PIAS4Q8N2W9 510 aaPredicted RBP7.65□□□□□ -1.18
ACTN1-213ENST00000554508 SMYD1Q8NB12 490 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 RNF217Q8TC41 542 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 COX4I2Q96KJ9 171 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 MCHR1Q99705 422 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 ARHGDIGQ99819 225 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 TMEM43Q9BTV4 400 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 TRAF4Q9BUZ4 470 aaPredicted RBP7.65□□□□□ -1.18
ACTN1-213ENST00000554508 PRR14Q9BWN1 585 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 LINC00470Q9BZP3 86 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 GSX1Q9H4S2 264 aaPredicted RBP7.65□□□□□ -1.18
ACTN1-213ENST00000554508 FKRPQ9H9S5 495 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 SPAG4Q9NPE6 437 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 CMTM6Q9NX76 183 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 NDE1Q9NXR1 346 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 ADA2Q9NZK5 511 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 RCE1Q9Y256 329 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 AP3M1Q9Y2T2 418 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 CORINQ9Y5Q5 1042 aa7.65□□□□□ -1.18
ACTN1-213ENST00000554508 IGKV1D-42A0A075B6H8 117 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 RPL36A-HNRNPH2H7BZ11 118 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 H7C1Q1 480 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 M0R082 166 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 M0R1B8 84 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 NME4O00746 187 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 GSTA4O15217 222 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 CHP2O43745 196 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 TPST2O60704 377 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 SLC43A1O75387 559 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 ZNF432O94892 652 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 MT-ATP6P00846 226 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 BGLAPP02818 100 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 PCGF2P35227 344 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 GZMMP51124 257 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 CDH12P55289 794 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 SH3BGRP55822 239 aaPredicted RBP7.64□□□□□ -1.19
ACTN1-213ENST00000554508 CLDN17P56750 224 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 LIPEQ05469 1076 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 VMACQ2NL98 169 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 HMBOX1Q6NT76 420 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 C8orf82Q6P1X6 216 aaPredicted RBP7.64□□□□□ -1.19
ACTN1-213ENST00000554508 CLEC9AQ6UXN8 241 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 LINC00114Q6XXX2 140 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 RINLQ6ZS11 566 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 LSRQ86X29 649 aaPredicted RBP7.64□□□□□ -1.19
ACTN1-213ENST00000554508 SLC15A3Q8IY34 581 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 DEFB107AQ8IZN7 70 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 PGAM4Q8N0Y7 254 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 KDM8Q8N371 416 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 SCAIQ8N9R8 606 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 OR2T12Q8NG77 320 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 OR1K1Q8NGR3 316 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 ZNF417Q8TAU3 575 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 MAGEE2Q8TD90 523 aaPredicted RBP7.64□□□□□ -1.19
ACTN1-213ENST00000554508 SLC26A7Q8TE54 656 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 SLC41A3Q96GZ6 507 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 ZNF583Q96ND8 569 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 ZNF587Q96SQ5 575 aaPredicted RBP7.64□□□□□ -1.19
ACTN1-213ENST00000554508 DHRS9Q9BPW9 319 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 WFDC6Q9BQY6 131 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 ASPNQ9BXN1 380 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 BARX1Q9HBU1 254 aaPredicted RBP7.64□□□□□ -1.19
ACTN1-213ENST00000554508 MOV10Q9HCE1 1003 aaKnown RBP7.64□□□□□ -1.19
ACTN1-213ENST00000554508 B3GAT1Q9P2W7 334 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 POU2F3Q9UKI9 436 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 USP22Q9UPT9 525 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 CSPG4Q6UVK1 2322 aa7.64□□□□□ -1.19
ACTN1-213ENST00000554508 YLPM1P49750 1951 aaKnown RBP7.64□□□□□ -1.19
ACTN1-213ENST00000554508 NIPBLQ6KC79 2804 aaeCLIP7.63□□□□□ -1.19
ACTN1-213ENST00000554508 CHD3Q12873 2000 aaKnown RBP7.63□□□□□ -1.19
ACTN1-213ENST00000554508 ARPC4-TTLL3A0A0A6YYG9 625 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 ELOVL7A1L3X0 281 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 FAM220BPB1ANY3 271 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 E7EQL1 145 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 MS4A18H0YCH9 400 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 UPK3AO75631 287 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 CD8AP01732 235 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 OPN1SWP03999 348 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 HEXAP06865 529 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 T-ENOLP0DO92 83 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 BMP4P12644 408 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 NQO1P15559 274 aaKnown RBP7.63□□□□□ -1.19
ACTN1-213ENST00000554508 CDH2P19022 906 aaPredicted RBP7.63□□□□□ -1.19
ACTN1-213ENST00000554508 CD247P20963 164 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 TTKP33981 857 aa7.63□□□□□ -1.19
ACTN1-213ENST00000554508 CDKN1AP38936 164 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms