RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 DNAAF3Q8N9W5 541 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 GATSQ8NAP1 163 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 OR51L1Q8NGJ5 315 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 MAGEE2Q8TD90 523 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-211ENST00000554437 TADA1Q96BN2 335 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 MBOAT4Q96T53 435 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 SLC29A1Q99808 456 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 P2RY13Q9BPV8 354 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 PAXXQ9BUH6 204 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 YTHDF1Q9BYJ9 559 aaKnown RBP3.69□□□□□ -1.82
SCFD1-211ENST00000554437 OR2AG1Q9H205 316 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 NMRAL1Q9HBL8 299 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 ADAP2Q9NPF8 381 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 IFNKQ9P0W0 207 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 MTRF1LQ9UGC7 380 aaKnown RBP3.69□□□□□ -1.82
SCFD1-211ENST00000554437 ZNF221Q9UK13 617 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 CLEC4EQ9ULY5 219 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 FLVCR2Q9UPI3 526 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 DHRS7Q9Y394 339 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 ATP6V1DQ9Y5K8 247 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 FRMPD4Q14CM0 1322 aa3.69□□□□□ -1.82
SCFD1-211ENST00000554437 IGHV3-35A0A0C4DH35 117 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 GOLGA8QA0A0J9YX86 632 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 RAB19A4D1S5 217 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 CCDC182A6NF36 153 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 A8MXQ7 604 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 F5H6K3 240 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-211ENST00000554437 TMEM50AO95807 157 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 F10P00742 488 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 SERPINE2P07093 398 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 UBCP0CG48 685 aaKnown RBP3.68□□□□□ -1.82
SCFD1-211ENST00000554437 XRCC1P18887 633 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-211ENST00000554437 KITLGP21583 273 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 GNA11P29992 359 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 BLVRAP53004 296 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 RAB10P61026 200 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 RPS6P62753 249 aaKnown RBP3.68□□□□□ -1.82
SCFD1-211ENST00000554437 LRRC63Q05C16 580 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 KLRC3Q07444 240 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 KLRB1Q12918 225 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 EIF2B1Q14232 305 aaKnown RBP3.68□□□□□ -1.82
SCFD1-211ENST00000554437 TGIF1Q15583 401 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 SLC15A2Q16348 729 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 SLC25A52Q3SY17 297 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 CYBRD1Q53TN4 286 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 OR52W1Q6IF63 320 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 ENPP6Q6UWR7 440 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 CYS1Q717R9 158 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 HSD11B1LQ7Z5J1 315 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 SNX20Q7Z614 316 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 OR5L2Q8NGL0 311 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 FNDC8Q8TC99 324 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 C8orf44Q96CB5 159 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 DNAJA3Q96EY1 480 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 NDEL1Q9GZM8 345 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 RAB1BQ9H0U4 201 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 POPDC2Q9HBU9 364 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 CSNK1G1Q9HCP0 422 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 MRPL47Q9HD33 250 aaKnown RBP3.68□□□□□ -1.82
SCFD1-211ENST00000554437 INPP5EQ9NRR6 644 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 SIGLEC8Q9NYZ4 499 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 PHF11Q9UIL8 331 aa3.68□□□□□ -1.82
SCFD1-211ENST00000554437 RBMX2Q9Y388 322 aaKnown RBP3.68□□□□□ -1.82
SCFD1-211ENST00000554437 EXOSC1Q9Y3B2 195 aaKnown RBP3.68□□□□□ -1.82
SCFD1-211ENST00000554437 KBTBD11-OT1A0A1B0GTJ5 212 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 A0A1W2PPV9 198 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 TRPC5OSA6NMA1 111 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 A8MUA0 341 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 TNFSF11O14788 317 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 P04436 131 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 HBQ1P09105 142 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 MYL2P10916 166 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 HOXB8P17481 243 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 GCAP28676 217 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 PRDX3P30048 256 aaKnown RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 PRKAR2BP31323 418 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 NAA10P41227 235 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 ARRB1P49407 418 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 EMDP50402 254 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 PSMD4P55036 377 aaKnown RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 CLDN18P56856 261 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 LYZP61626 148 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 PSMC5P62195 406 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 KCNJ2P63252 427 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 MRPS15P82914 257 aaKnown RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 RAD51Q06609 339 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 CD47Q08722 323 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 ASAH1Q13510 395 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 SERTAD2Q14140 314 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 SLC5A12Q1EHB4 618 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 QRICH1Q2TAL8 776 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 PAN3Q58A45 887 aaKnown RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 DMRTC1Q5HYR2 192 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 C9orf135Q5VTT2 229 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 APTXQ7Z2E3 356 aaKnown RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 GPR65Q8IYL9 337 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 ZSCAN4Q8NAM6 433 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 FBXL13Q8NEE6 735 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 OR4A4PQ8NGN8 299 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms