RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 NUBP2Q9Y5Y2 271 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ACTL7AQ9Y615 435 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ALG5Q9Y673 324 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 SETXQ7Z333 2677 aaKnown RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 GON4LQ3T8J9 2241 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 KNTC1P50748 2209 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CPED1A4D0V7 1026 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 METTL15A6NJ78 407 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 E9PQ18 207 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 RAD1O60671 282 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 TRIM13O60858 407 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 EIF3GO75821 320 aaKnown RBP eCLIP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 PSMG1O95456 288 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CD1AP06126 327 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 RRASP10301 218 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 FGF3P11487 239 aaPredicted RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SLC2A4P14672 509 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 LIFP15018 202 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CD36P16671 472 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CD22P20273 847 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 FPR2P25090 351 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 DPP4P27487 766 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 RPL10P27635 214 aaKnown RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SSTR1P30872 391 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CALCRP30988 508 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 FCGR2BP31994 310 aaPredicted RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 THBS4P35443 961 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 RAB13P51153 203 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CRYBA4P53673 196 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 KCNK10P57789 538 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 BLOC1S1P78537 153 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 ID3Q02535 119 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 NFATC3Q12968 1075 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SKP2Q13309 424 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 KEAP1Q14145 624 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 ACOX1Q15067 660 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CNPY1Q3B7I2 92 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 COX19Q49B96 90 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 ATP13A5Q4VNC0 1218 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 KLHL12Q53G59 568 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 ARMCX4Q5H9R4 360 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CRB2Q5IJ48 1285 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 LRIF1Q5T3J3 769 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CCNJQ5T5M9 372 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 RPL13AP3Q6NVV1 102 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CEACAM20Q6UY09 585 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 MOB3CQ70IA8 216 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 RRM2BQ7LG56 351 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 PAQR7Q86WK9 346 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 PHF13Q86YI8 300 aaPredicted RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 TDRPQ86YL5 185 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM126BQ8IUX1 230 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CCDC71Q8IV32 467 aaPredicted RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 ZDHHC23Q8IYP9 409 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 RCOR2Q8IZ40 523 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 C1orf87Q8N0U7 546 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 PUSL1Q8N0Z8 303 aaKnown RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 FAM109AQ8N4B1 249 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 LRRC57Q8N9N7 239 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 FAM71CQ8NEG0 241 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 OR2L2Q8NH16 312 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 FAM110BQ8TC76 370 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 MRGPRDQ8TDS7 321 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 NUDCD2Q8WVJ2 157 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CNOT9Q92600 299 aaKnown RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 OTUB1Q96FW1 271 aaPredicted RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 PGAM5Q96HS1 289 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 KLHL32Q96NJ5 620 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SERPINB12Q96P63 405 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 LYSMD1Q96S90 227 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 NEURL2Q9BR09 285 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 PRDM14Q9GZV8 571 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CSTL1Q9H114 145 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SLITRK2Q9H156 845 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 OR51M1Q9H341 326 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SEMA6CQ9H3T2 930 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 PPP1R3EQ9H7J1 279 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 MOV10Q9HCE1 1003 aaKnown RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 RANGRFQ9HD47 186 aaPredicted RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 PAK5Q9P286 719 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 EPHA6Q9UF33 1036 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 BTNL2Q9UIR0 455 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 ABCG2Q9UNQ0 655 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 COPS3Q9UNS2 423 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CMAHPQ9Y471 501 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CSDC2Q9Y534 153 aaKnown RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 GOLGA4Q13439 2230 aaKnown RBP2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SHANK1Q9Y566 2161 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 TRAV26-1A0A087WT03 109 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 IGHV1OR21-1A0A087WYE8 117 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 FAM240BA0A1B0GVZ2 78 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SMCO3A2RU48 225 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SIGLEC16A6NMB1 481 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 A8MUA0 341 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 C21orf140B9A014 251 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 CXCR6O00574 342 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 AZIN1O14977 448 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 SURF4O15260 269 aa2.46□□□□□ -2.02
PRPF39-206ENST00000554429 RS1O15537 224 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms