RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 SLC34A1Q06495 639 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 ST3GAL3Q11203 375 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 LAPTM4AQ15012 233 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 TRAM2Q15035 370 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 GUSBP1Q15486 140 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 ALG10BQ5I7T1 473 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 SWT1Q5T5J6 900 aaKnown RBP12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 ZNF770Q6IQ21 691 aaPredicted RBP12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 ALKBH2Q6NS38 261 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 PODNL1Q6PEZ8 512 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 ULK3Q6PHR2 472 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 TBPL2Q6SJ96 375 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 GRINAQ7Z429 371 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 ADGRG3Q86Y34 549 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 TMEM255BQ8WV15 326 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 DNAJA4Q8WW22 397 aaPredicted RBP12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 NRG4Q8WWG1 115 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 IGFBPL1Q8WX77 278 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 PLPPR2Q96GM1 343 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 REEP1Q9H902 201 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 C12orf10Q9HB07 376 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 AP4B1Q9Y6B7 739 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 U3KQV3 271 aa12.44□□□□□ -0.42
SPTLC2-202ENST00000554365 A0A087WUJ7 227 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 A0A087WUU8 490 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 SH3PXD2BA1X283 911 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 SAC3D1A6NKF1 404 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 GNGT2O14610 69 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 PPP3CBP16298 524 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 IL11P20809 199 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 POLR2HP52434 150 aaKnown RBP12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 UGT2B15P54855 530 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 SMIM11AP58511 58 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 TNK1Q13470 666 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 GK3PQ14409 553 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 SHQ1Q6PI26 577 aaKnown RBP12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 STAC2Q6ZMT1 411 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 GGNQ86UU5 652 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 GTPBP8Q8N3Z3 284 aaPredicted RBP12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 ICA1LQ8NDH6 482 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 OR6K3Q8NGY3 331 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 OR5K1Q8NHB7 308 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 TMEM234Q8WY98 164 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 MRGPRX4Q96LA9 322 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 PLSCR4Q9NRQ2 329 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 ZNF701Q9NV72 531 aaPredicted RBP12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 STOML1Q9UBI4 398 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 RPS6KB2Q9UBS0 482 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 OAZ3Q9UMX2 235 aa12.43□□□□□ -0.42
SPTLC2-202ENST00000554365 TLN2Q9Y4G6 2542 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 ZANQ9Y493 2812 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 TMED7-TICAM2A0A0A6YYA0 188 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 TMEM72A0PK05 275 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 HS3ST1O14792 307 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 PIP5K1CO60331 668 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 CRLF1O75462 422 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 PAX1P15863 534 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 PTNP21246 168 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 PEX2P28328 305 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 EGR4Q05215 589 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 MERTKQ12866 999 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 MICAQ29983 383 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 GLYR1Q49A26 553 aaPredicted RBP12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 FGD3Q5JSP0 725 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 OGFRL1Q5TC84 451 aaPredicted RBP12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 LPCAT4Q643R3 524 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 ZNF611Q8N823 705 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 MAPK1IP1LQ8NDC0 245 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 ACOT11Q8WXI4 607 aaPredicted RBP12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 ZBTB8AQ96BR9 441 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 NRBF2Q96F24 287 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 GMPPAQ96IJ6 420 aaPredicted RBP12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 MPP4Q96JB8 637 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 PSD2Q9BQI7 771 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 ACTR6Q9GZN1 396 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 GABARAPL1Q9H0R8 117 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 FANCFQ9NPI8 374 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 MEPEQ9NQ76 525 aaPredicted RBP12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 LAMP3Q9UQV4 416 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 TMED7Q9Y3B3 224 aa12.42□□□□□ -0.42
SPTLC2-202ENST00000554365 ZC3H12DA2A288 527 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 RNF223E7ERA6 249 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 PDLIM1O00151 329 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 SS18L1O75177 396 aaPredicted RBP12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 NPIPB7O75200 414 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 E2F6O75461 281 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 SYNGR4O95473 234 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 OPN1LWP04000 364 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 PNMTP11086 282 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 ZNF17P17021 662 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 PRKACGP22612 351 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 ADH6P28332 368 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 IFNA8P32881 189 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 APOBEC1P41238 236 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 EIF1P41567 113 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 RBM34P42696 430 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 HTR3AP46098 478 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 TRIP10Q15642 601 aa12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 CTU2Q2VPK5 515 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-202ENST00000554365 CSPG4Q6UVK1 2322 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms