RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TRIM25Q14258 630 aaKnown RBP14.73□□□□□ -0.05
NEK9-204ENST00000554258 TIMM23BQ5SRD1 257 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 RNF220Q5VTB9 566 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 GLYATQ6IB77 296 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 EIF3MQ7L2H7 374 aaKnown RBP14.73□□□□□ -0.05
NEK9-204ENST00000554258 NUFIP2Q7Z417 695 aaKnown RBP14.73□□□□□ -0.05
NEK9-204ENST00000554258 VRK2Q86Y07 508 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 BHLHE22Q8NFJ8 381 aaPredicted RBP14.73□□□□□ -0.05
NEK9-204ENST00000554258 WDR60Q8WVS4 1066 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 SLC35B4Q969S0 331 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 TAMM41Q96BW9 452 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 CLPTM1LQ96KA5 538 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 LAT2Q9GZY6 243 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 PTGES2Q9H7Z7 377 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 PRDM4Q9UKN5 801 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 ZNF443Q9Y2A4 671 aaPredicted RBP14.73□□□□□ -0.05
NEK9-204ENST00000554258 SLC35A3Q9Y2D2 325 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 SPEF1Q9Y4P9 236 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 ATP23Q9Y6H3 246 aa14.73□□□□□ -0.05
NEK9-204ENST00000554258 WNK2Q9Y3S1 2297 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 CDHR4A6H8M9 788 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 TPST1O60507 370 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 LILRA1O75019 489 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 IL7RP16871 459 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 CD247P20963 164 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 AQP1P29972 269 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 ZNF83P51522 516 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 UBA52P62987 128 aaKnown RBP14.72□□□□□ -0.05
NEK9-204ENST00000554258 MS4A2Q01362 244 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 LARS2Q15031 903 aaKnown RBP14.72□□□□□ -0.05
NEK9-204ENST00000554258 LIN52Q52LA3 116 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 ZNF311Q5JNZ3 666 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 KLHL17Q6TDP4 642 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 ZNF836Q6ZNA1 936 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 HMGN2P46Q86SG4 172 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 ARMC8Q8IUR7 673 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 CLIP4Q8N3C7 705 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 TOR1AIP2Q8NFQ8 470 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 VRK1Q99986 396 aaPredicted RBP14.72□□□□□ -0.05
NEK9-204ENST00000554258 MUC13Q9H3R2 512 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 ESM1Q9NQ30 184 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 EXOSC3Q9NQT5 275 aaKnown RBP14.72□□□□□ -0.05
NEK9-204ENST00000554258 EGFL7Q9UHF1 273 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 ICAM5Q9UMF0 924 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 SNX13Q9Y5W8 968 aa14.72□□□□□ -0.05
NEK9-204ENST00000554258 CLDN24A6NM45 220 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 B4DSR2 109 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 ACOT8O14734 319 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 GSTA4O15217 222 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 OIP5O43482 229 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 BCAS1O75363 584 aaPredicted RBP14.71□□□□□ -0.05
NEK9-204ENST00000554258 PDE5AO76074 875 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 LGI1O95970 557 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 IFNA14P01570 189 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 TCN1P20061 433 aaPredicted RBP14.71□□□□□ -0.05
NEK9-204ENST00000554258 CD40P25942 277 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 APOBEC3AP31941 199 aaPredicted RBP14.71□□□□□ -0.05
NEK9-204ENST00000554258 MSX2P35548 267 aaPredicted RBP14.71□□□□□ -0.05
NEK9-204ENST00000554258 TRAP1Q12931 704 aaKnown RBP14.71□□□□□ -0.05
NEK9-204ENST00000554258 SKP2Q13309 424 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 CCNIQ14094 377 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 ZSCAN26Q16670 478 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 DUSP7Q16829 419 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 MRPL2Q5T653 305 aaKnown RBP14.71□□□□□ -0.05
NEK9-204ENST00000554258 CBLL1Q75N03 491 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 ZDHHC22Q8N966 263 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 GPR32P1Q8NGA4 272 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 PHOSPHO1Q8TCT1 267 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 RASSF5Q8WWW0 418 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 CNOT9Q92600 299 aaKnown RBP14.71□□□□□ -0.05
NEK9-204ENST00000554258 FBXO17Q96EF6 278 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 PCDHAC1Q9H158 963 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 EVA1AQ9H8M9 152 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 ACTR3BQ9P1U1 418 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 MAGEL2Q9UJ55 1249 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 ING1Q9UK53 422 aaPredicted RBP14.71□□□□□ -0.05
NEK9-204ENST00000554258 GRIP1Q9Y3R0 1128 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 TENM3Q9P273 2699 aa14.71□□□□□ -0.05
NEK9-204ENST00000554258 SHISA8B8ZZ34 492 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 ARPC2O15144 300 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 ZNF264O43296 627 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 CSTAP01040 98 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 UBL4AP11441 157 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 NCK1P16333 377 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 SUMO3P55854 103 aaPredicted RBP14.7□□□□□ -0.06
NEK9-204ENST00000554258 SELENOWP63302 87 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 ZNF117Q03924 483 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 GLYR1Q49A26 553 aaPredicted RBP14.7□□□□□ -0.06
NEK9-204ENST00000554258 CYBRD1Q53TN4 286 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 CBLN3Q6UW01 205 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 Q6ZT83 130 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 COMTD1Q86VU5 262 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 P2RY8Q86VZ1 359 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 GATSQ8NAP1 163 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 ABHD3Q8WU67 409 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 ASB9Q96DX5 294 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 C1GALT1C1Q96EU7 318 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 RNF145Q96MT1 663 aa14.7□□□□□ -0.06
NEK9-204ENST00000554258 DDX28Q9NUL7 540 aaKnown RBP14.7□□□□□ -0.06
NEK9-204ENST00000554258 DCAF13Q9NV06 445 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms