RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 IGHV2-70DA0A0C4DH43 119 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 TRBV7-9A0A0J9YWB2 115 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 TEX48A0A1B0GUV7 120 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 A0A1B0GW15 77 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 PRSS37A4D1T9 235 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 CENPXA8MT69 81 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 IDSB3KWA1 339 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 E7ESA3 106 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SIRPB1O00241 398 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SOCS3O14543 225 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 DYNC1I1O14576 645 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 HSD17B6O14756 317 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 GPAA1O43292 621 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 CXCL13O43927 109 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 PRKYO43930 277 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 HCN1O60741 890 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SLC19A2O60779 497 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ENTPD5O75356 428 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 UGT2B17O75795 530 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 CABYRO75952 493 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 OR7A10O76100 309 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 FARS2O95363 451 aaKnown RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 CLIC3O95833 236 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SNAI1O95863 264 aaPredicted RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 HPP00738 406 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 FGGP02679 453 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 S100A6P06703 90 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SERPINE2P07093 398 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 WNT2P09544 360 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 PRPS2P11908 318 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 CCL2P13500 99 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 NQO2P16083 231 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ZNF43P17038 809 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 IDSP22304 550 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 FASP25445 335 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 IL12BP29460 328 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 PRDX3P30048 256 aaKnown RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 HMGCLP35914 325 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SPAM1P38567 509 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 OPRL1P41146 370 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 NAA10P41227 235 aaPredicted RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 XCR1P46094 333 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 MRPL19P49406 292 aaKnown RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 SLC26A2P50443 739 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 GPM6AP51674 278 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 PRKXP51817 358 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 CCNHP51946 323 aaPredicted RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 ARHGDIAP52565 204 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 CRYBA2P53672 197 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 LIM2P55344 173 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ATP5J2P56134 94 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 UBE2KP61086 200 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 PSMC5P62195 406 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ERVK-25P63136 954 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 MRPS22P82650 360 aaKnown RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 LRRC63Q05C16 580 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ZNF33AQ06730 810 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 PUDPQ08623 228 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SIGLEC14Q08ET2 396 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 STX3Q13277 289 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ITGB3BPQ13352 177 aaPredicted RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 IL18R1Q13478 541 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SLC10A1Q14973 349 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 OXA1LQ15070 435 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 TSC22D1Q15714 1073 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ZNF77Q15935 545 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 GABRA6Q16445 453 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SLC22A6Q4U2R8 563 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 OR52E8Q6IFG1 317 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 FAM199XQ6PEV8 388 aaPredicted RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 LCLAT1Q6UWP7 414 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 STOX1Q6ZVD7 989 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 MRPL21Q7Z2W9 205 aaKnown RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 NUFIP2Q7Z417 695 aaKnown RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 CCDC71Q8IV32 467 aaPredicted RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 MFSD6LQ8IWD5 586 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ST13P4Q8IZP2 240 aaPredicted RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 JAGN1Q8N5M9 183 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 LINC00469Q8N7U9 141 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ZNF781Q8N8C0 355 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 LRRC75AQ8NAA5 344 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 LYPD6BQ8NI32 183 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ANGPTL6Q8NI99 470 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ZNF519Q8TB69 540 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ZNF502Q8TBZ5 544 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 TCTEX1D2Q8WW35 142 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 CACNG8Q8WXS5 425 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 RASL10AQ92737 203 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 TOMM40LQ969M1 308 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ITFG2Q969R8 447 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 CIDECQ96AQ7 238 aaPredicted RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 CCDC124Q96CT7 223 aaKnown RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 RNF170Q96K19 258 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 HSFY1Q96LI6 401 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 CSPG4P5Q96PW8 444 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 ALS2CR12Q96Q35 445 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 XPO6Q96QU8 1125 aaKnown RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 OR5B12Q96R08 314 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 SLC35A5Q9BS91 424 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 TMEM175Q9BSA9 504 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms