RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SH3GL1Q99961 368 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 P2RY13Q9BPV8 354 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 TMEM59Q9BXS4 323 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 GBA3Q9H227 469 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 PTGES2Q9H7Z7 377 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 ABCD2Q9UBJ2 740 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 BTNL2Q9UIR0 455 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 TRAF3IP3Q9Y228 551 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 INSRP06213 1382 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 PHLPP2Q6ZVD8 1323 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 IGLV3-22A0A075B6J6 115 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 FAM168BA1KXE4 195 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 CCL21O00585 134 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 OR2J3O76001 311 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 STAG3L3P0CL85 134 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 PSMB1P20618 241 aaKnown RBP3.7□□□□□ -1.82
SCFD1-209ENST00000553280 GLP1RP43220 463 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 ARRB1P49407 418 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-209ENST00000553280 CSNK1G2P78368 415 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 ZNF45Q02386 682 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 TGFBR3Q03167 851 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 MRPL23Q16540 153 aaKnown RBP3.7□□□□□ -1.82
SCFD1-209ENST00000553280 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 TRIM40Q6P9F5 258 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 TMIGD1Q6UXZ0 262 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 Q6ZSR3 168 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 EIF3MQ7L2H7 374 aaKnown RBP3.7□□□□□ -1.82
SCFD1-209ENST00000553280 OTUD6AQ7L8S5 288 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 TMCO2Q7Z6W1 182 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-209ENST00000553280 OFCC1Q8IZS5 231 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 COMMD1Q8N668 190 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 NKAPP1Q8N9T2 125 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 BPIFCQ8NFQ6 507 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 OR2AP1Q8NGE2 309 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 OR51S1Q8NGJ8 323 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 FGF14Q92915 247 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 FAM122AQ96E09 287 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 ATP5SQ99766 215 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 ARHGDIGQ99819 225 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 EBF4Q9BQW3 602 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 IL26Q9NPH9 171 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 MARCH5Q9NX47 278 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 KCNIP1Q9NZI2 227 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 CD274Q9NZQ7 290 aa3.7□□□□□ -1.82
SCFD1-209ENST00000553280 GOSR2O14653 212 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 SOX15O60248 233 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 HSPB1P04792 205 aaKnown RBP3.69□□□□□ -1.82
SCFD1-209ENST00000553280 SLC2A5P22732 501 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 RRM2P31350 389 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 CCT6AP40227 531 aaKnown RBP3.69□□□□□ -1.82
SCFD1-209ENST00000553280 DLX1P56177 255 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 GPX6P59796 221 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 SELENOTP62341 195 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 C1orf100Q5SVJ3 147 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 SSX9Q7RTT3 188 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 FBXO16Q8IX29 292 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-209ENST00000553280 MS4A15Q8N5U1 240 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 ZNF564Q8TBZ8 553 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-209ENST00000553280 PIBF1Q8WXW3 757 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 NRGNQ92686 78 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 KIFAP3Q92845 792 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 SMARCD2Q92925 531 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 HSFY1Q96LI6 401 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 NICN1Q9BSH3 213 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 IQCGQ9H095 443 aaKnown RBP3.69□□□□□ -1.82
SCFD1-209ENST00000553280 RNF167Q9H6Y7 350 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 SH2D2AQ9NP31 389 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 TMEM9Q9P0T7 183 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 MMP17Q9ULZ9 603 aa3.69□□□□□ -1.82
SCFD1-209ENST00000553280 DYNC1I1O14576 645 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 RAB29O14966 203 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 ZNF780AO75290 641 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-209ENST00000553280 TSPAN13O95857 204 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 TIMP1P01033 207 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 CMA1P23946 247 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 ATP5C1P36542 298 aaKnown RBP3.68□□□□□ -1.82
SCFD1-209ENST00000553280 NAA10P41227 235 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-209ENST00000553280 NSG1P42857 185 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 CCNHP51946 323 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-209ENST00000553280 SPAG1Q07617 926 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 MAB21L1Q13394 359 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 EOGTQ5NDL2 527 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 LY6G6FQ5SQ64 297 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 SLC25A30Q5SVS4 291 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 C9orf135Q5VTT2 229 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 TMEM53Q6P2H8 277 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 CERS6Q6ZMG9 384 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 ZNF836Q6ZNA1 936 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 ASCL5Q7RTU5 278 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 ZNF546Q86UE3 836 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 MYPOPQ86VE0 399 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-209ENST00000553280 ZNF100Q8IYN0 542 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 KATNAL2Q8IYT4 538 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 GABRG1Q8N1C3 465 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 GPD1LQ8N335 351 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 FBXL16Q8N461 479 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 OR4A4PQ8NGN8 299 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 OR1S2Q8NGQ3 325 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 OR2G2Q8NGZ5 317 aa3.68□□□□□ -1.82
SCFD1-209ENST00000553280 ACOT11Q8WXI4 607 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms