RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TFPIP10646 304 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 AHCYP23526 432 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 IDUAP35475 653 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 OC90Q02509 493 aaPredicted RBP17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 GLYR1Q49A26 553 aaPredicted RBP17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 ABHD17BQ5VST6 288 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 LEG1Q6P5S2 330 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 C19orf48Q6RUI8 117 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 VASH2Q86V25 355 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 CLEC1AQ8NC01 280 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 TMEM185BQ9H7F4 350 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 DEPPQ9NTK1 212 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 CHCHD3Q9NX63 227 aaKnown RBP17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 ERVK13-1Q9NX77 482 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 LRFN1Q9P244 771 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 NEURL1O76050 574 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 F10P00742 488 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 SBK2P0C263 348 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 SPI1P17947 270 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 CD79BP40259 229 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 WNT4P56705 351 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 SELENBP1Q13228 472 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 SRSF6Q13247 344 aaKnown RBP17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 KRR1Q13601 381 aaKnown RBP17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 SSX1Q16384 188 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 SPINK14Q6IE38 97 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 EXD3Q8N9H8 876 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 OR51L1Q8NGJ5 315 aa17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 RPL3LQ92901 407 aaKnown RBP17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 RPH3AQ9Y2J0 694 aaPredicted RBP17.6■□□□□ 0.41
RBFOX1-215ENST00000553186 MS4A18H0YCH9 400 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 SHC1P29353 583 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 NFATC3Q12968 1075 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 C1DQ13901 141 aaKnown RBP17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 ACKR1Q16570 336 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 TSTQ16762 297 aaKnown RBP17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 MS4A18Q3C1V0 323 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 TUBA3EQ6PEY2 450 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 H1FNTQ75WM6 255 aaPredicted RBP17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 JAZF1Q86VZ6 243 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 ATCAYQ86WG3 371 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 ACBD7Q8N6N7 88 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 TMEM99Q8N816 258 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 SLC25A43Q8WUT9 341 aaPredicted RBP17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 DCUN1D5Q9BTE7 237 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 RACGAP1Q9H0H5 632 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 SPIN1Q9Y657 262 aaPredicted RBP17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 LRRC3CA6NJW4 275 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 OR6A2O95222 327 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 OPN1LWP04000 364 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 SLC25A1P53007 311 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 PUDPQ08623 228 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 ZP4Q12836 540 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 MLLT11Q13015 90 aaPredicted RBP17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 GGTLC2Q14390 218 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 RTP5Q14D33 572 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 SPCS2Q15005 226 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 ARIH2OSQ8N7S6 290 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 TM9SF4Q92544 642 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 NXPE2Q96DL1 559 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 ZMYND19Q96E35 227 aaPredicted RBP17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 TIMP4Q99727 224 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 ALKBH4Q9NXW9 302 aa17.59■□□□□ 0.41
RBFOX1-215ENST00000553186 C12orf71A8MTZ7 269 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 CCRL2O00421 344 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 PLGP00747 810 aaPredicted RBP17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 IGHMP01871 453 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 MRPL3P09001 348 aaKnown RBP17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 GADD45AP24522 165 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 FKBP2P26885 142 aaKnown RBP17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 DIO1P49895 249 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 GPR85P60893 370 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 LSAMPQ13449 338 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 PON3Q15166 354 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 KDM8Q8N371 416 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 ZNF519Q8TB69 540 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 GATAD2BQ8WXI9 593 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 SIGLEC12Q96PQ1 595 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 TXNIPQ9H3M7 391 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 RPRD1BQ9NQG5 326 aaKnown RBP17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 CNTRLQ7Z7A1 2325 aa17.58■□□□□ 0.4
RBFOX1-215ENST00000553186 HLA-DOBP13765 273 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 CLK1P49759 484 aaKnown RBP17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 RPL27P61353 136 aaKnown RBP17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 POU4F2Q12837 409 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 SLC35D3Q5M8T2 416 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 LINC01590Q5TEZ4 76 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 TSSK2Q96PF2 358 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 ARHGAP9Q9BRR9 750 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 CHST11Q9NPF2 352 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 FANCFQ9NPI8 374 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 DKKL1Q9UK85 242 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 B3GALT5Q9Y2C3 310 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 MED13Q9UHV7 2174 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 A0A1W2PNR3 127 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 OR2M5A3KFT3 312 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 H7C1C5 153 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 DCTN6O00399 190 aa17.57■□□□□ 0.4
RBFOX1-215ENST00000553186 NKX2-8O15522 239 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms