RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 RWDD2BP57060 319 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 OR4D2P58180 307 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CDKL1Q00532 357 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CDK16Q00536 496 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 TNK1Q13470 666 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SLMAPQ14BN4 828 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 HERC3Q15034 1050 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 EBPQ15125 230 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 TAF13Q15543 124 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 TPSAB1Q15661 275 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 MEP1BQ16820 701 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ODF4Q2M2E3 257 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CTU2Q2VPK5 515 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 PGGHGQ32M88 737 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 C1orf185Q5T7R7 199 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 AP1ARQ63HQ0 302 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 STEAP4Q687X5 459 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 DUPD1Q68J44 220 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 C11orf71Q6IPW1 123 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CASC4Q6P4E1 433 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CORO6Q6QEF8 472 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 AGTRAPQ6RW13 159 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SASS6Q6UVJ0 657 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SH2D5Q6ZV89 423 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 RAPH1Q70E73 1250 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 OTOAQ7RTW8 1153 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 PIWIL3Q7Z3Z3 882 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 NRARPQ7Z6K4 114 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 LINC00523Q86TU6 105 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ASPGQ86U10 573 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 TUSC5Q8IXB3 177 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CPNE9Q8IYJ1 553 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CCDC170Q8IYT3 715 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CDK20Q8IZL9 346 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 FBXW8Q8N3Y1 598 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 RNF10Q8N5U6 811 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 NHLRC2Q8NBF2 726 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 POC1AQ8NBT0 407 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 NPEPL1Q8NDH3 523 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CHDHQ8NE62 594 aaPredicted RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 C17orf47Q8NEP4 570 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 DMBX1Q8NFW5 382 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 OR10G3Q8NGC4 313 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 OR13A1Q8NGR1 328 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 VANGL1Q8TAA9 524 aaPredicted RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SPPL2AQ8TCT8 520 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SLC26A7Q8TE54 656 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 GRK7Q8WTQ7 553 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF473Q8WTR7 871 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 UBLCP1Q8WVY7 318 aaPredicted RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 NCLNQ969V3 563 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 PYCR2Q96C36 320 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 PGM2Q96G03 612 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 BSCL2Q96G97 398 aaPredicted RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SNF8Q96H20 258 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 MAGED4Q96JG8 741 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CABS1Q96KC9 395 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 CCDC42Q96M95 316 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF681Q96N22 645 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF583Q96ND8 569 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 SERPINB12Q96P63 405 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 PANX3Q96QZ0 392 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 GPR21Q99679 349 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 MAPKAP1Q9BPZ7 522 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 FAM173AQ9BQD7 235 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 UGT2B28Q9BY64 529 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 FUT8Q9BYC5 575 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 IL22Q9GZX6 179 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ATG10Q9H0Y0 220 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 MMADHCQ9H3L0 296 aaPredicted RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 DDX31Q9H8H2 851 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 VPS37BQ9H9H4 285 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 KCNK13Q9HB14 408 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 PARVBQ9HBI1 364 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 GSN-AS1Q9NRJ2 163 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 INTS10Q9NVR2 710 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 FAM118AQ9NWS6 357 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 COQ3Q9NZJ6 369 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF225Q9UK10 706 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 PTBP2Q9UKA9 531 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 FBXO5Q9UKT4 447 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 FAF1Q9UNN5 650 aaPredicted RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 LIPT1Q9Y234 373 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 WDR83OSQ9Y284 106 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 MRPS18CQ9Y3D5 142 aaKnown RBP2.05□□□□□ -2.08
CPSF6-207ENST00000551516 MMACHCQ9Y4U1 282 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 BIRC6Q9NR09 4857 aa2.05□□□□□ -2.08
CPSF6-207ENST00000551516 IGLV3-32A0A0A0MS00 114 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 A0A0A6YYD5 115 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 TRGV5A0A0B4J1U4 118 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 TRAV24A0A0B4J272 114 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 TRBV11-1A0A0K0K1C0 115 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 A0A1W2PN81 502 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 A0A1W2PNV4 684 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 SYCE3A1L190 88 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 A4D1N5 150 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 C5orf52A6NGY3 159 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 DUXAA6NLW8 204 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 E7ESA3 106 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms