RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 DNAH9Q9NYC9 4486 aa3.09□□□□□ -1.92
LIMA1-206ENST00000550611 A0A087WZY1 265 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 IGHV4-61A0A0C4DH41 118 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 A0A1W2PRB8 838 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 TMEM89A2RUT3 159 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 MYO1GB0I1T2 1018 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SUPT3HB4E1H0 165 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SLCO1B7G3V0H7 640 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 NDUFS8O00217 210 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 PGRMC1O00264 195 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 UBFD1O14562 309 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 TNFSF11O14788 317 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SMAD9O15198 467 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 TCF21O43680 179 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SCO2O43819 266 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 GUCY1B2O75343 617 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SUPT3HO75486 399 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SEC31AO94979 1220 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SYNGR4O95473 234 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CLDN9O95484 217 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ANGPTL1O95841 491 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 PLGP00747 810 aaPredicted RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 IGKV1D-16P01601 117 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 PRB2P02812 416 aaPredicted RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 OPN1LWP04000 364 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 YES1P07947 543 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ALDOCP09972 364 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 IL32P24001 234 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 EDNRAP25101 427 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SHC1P29353 583 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CRABP2P29373 138 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 IL12BP29460 328 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 GP5P40197 560 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 OR3A2P47893 321 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 EFNA4P52798 201 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 MAPK12P53778 367 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CDH11P55287 796 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CARD18P57730 90 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 C17orf67Q0P5P2 114 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CSTF3Q12996 717 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 PDIA2Q13087 525 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 TRAF3Q13114 568 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 PPA1Q15181 289 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 RAB35Q15286 201 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 PPP1R7Q15435 360 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 GPR68Q15743 365 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF239Q16600 458 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZSWIM7Q19AV6 140 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 KRT71Q3SY84 523 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 GGTA1PQ4G0N0 100 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 HSP90B2PQ58FF3 399 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 TIMM23BQ5SRD1 257 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 GRTP1Q5TC63 336 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 LGSNQ5TDP6 509 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 FRG2Q64ET8 278 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF544Q6NX49 715 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SLC22A25Q6T423 547 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CCBE1Q6UXH8 406 aaPredicted RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 B3GLCTQ6Y288 498 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 Q6ZT83 130 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 BHLHA15Q7RTS1 189 aaPredicted RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SSX8Q7RTT4 187 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 PAGE2Q7Z2X7 111 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 GOLGA7Q7Z5G4 137 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CMC1Q7Z7K0 106 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF329Q86UD4 541 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 P2RY8Q86VZ1 359 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CCDC25Q86WR0 208 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 TUSC5Q8IXB3 177 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CENPLQ8N0S6 344 aaPredicted RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF619Q8N2I2 560 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 MUC15Q8N387 334 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 OR7G2Q8NG99 324 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 OR9A2Q8NGT5 310 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 OR4C3Q8NH37 302 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 FAM110BQ8TC76 370 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 RNF128Q8TEB7 428 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ABHD3Q8WU67 409 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF75CPQ92670 426 aaPredicted RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 KAT2AQ92830 837 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF524Q96C55 264 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 KLHL29Q96CT2 875 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 FRG2BQ96QU4 278 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 NAP1L3Q99457 506 aaPredicted RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CPNE1Q99829 537 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 DHRS9Q9BPW9 319 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ABHD14AQ9BUJ0 271 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 SRXN1Q9BYN0 137 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 POTEKPQ9BYX7 375 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 PRRG4Q9BZD6 226 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 TRIM31Q9BZY9 425 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 CTDSP1Q9GZU7 261 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 NUAK2Q9H093 628 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 NOL11Q9H8H0 719 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 EML4Q9HC35 981 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 LZTFL1Q9NQ48 299 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 FARSBQ9NSD9 589 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 MED17Q9NVC6 651 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 FAIMQ9NVQ4 179 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms