RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SERF1AO75920 110 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 GLRA2P23416 452 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 UGT1A3P35503 534 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 RPS9P46781 194 aaKnown RBP3.57□□□□□ -1.84
LIMA1-205ENST00000550592 GBX2P52951 348 aaPredicted RBP3.57□□□□□ -1.84
LIMA1-205ENST00000550592 IGLV3-21P80748 117 aaPredicted RBP3.57□□□□□ -1.84
LIMA1-205ENST00000550592 MECOMQ03112 1051 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 LIPNQ5VXI9 398 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 TMEM225Q6GV28 225 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 SYT10Q6XYQ8 523 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 MOB3BQ86TA1 216 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 ZNF677Q86XU0 584 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 ZBED8Q8IZ13 594 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 KIR3DL3Q8N743 410 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 SLC25A38Q96DW6 304 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 PELI1Q96FA3 418 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 NOL4LQ96MY1 436 aaPredicted RBP3.57□□□□□ -1.84
LIMA1-205ENST00000550592 TGM7Q96PF1 710 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 TUBGCP2Q9BSJ2 902 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 NXF5Q9H1B4 397 aaKnown RBP3.57□□□□□ -1.84
LIMA1-205ENST00000550592 PIPOXQ9P0Z9 390 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 TBK1Q9UHD2 729 aa3.57□□□□□ -1.84
LIMA1-205ENST00000550592 MYH13Q9UKX3 1938 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 C15orf38-AP3S2A0A0A6YYH1 394 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 A0A1B0GWB2 263 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 G3V4G9 280 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 ARPC3O15145 178 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 TAPBPO15533 448 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 IGLL1P15814 213 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 CALB2P22676 271 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 P2RY1P47900 373 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 P2RY4P51582 365 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 HNRNPA3P51991 378 aaKnown RBP3.56□□□□□ -1.84
LIMA1-205ENST00000550592 LRRC36Q1X8D7 754 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 LRRC23Q53EV4 343 aaPredicted RBP3.56□□□□□ -1.84
LIMA1-205ENST00000550592 PRR30Q53SZ7 412 aaPredicted RBP3.56□□□□□ -1.84
LIMA1-205ENST00000550592 C10orf120Q5SQS8 335 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 ATF7IP2Q5U623 682 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 DNM1P46Q6ZS02 220 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 TPRA1Q86W33 373 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 FBXO16Q8IX29 292 aaPredicted RBP3.56□□□□□ -1.84
LIMA1-205ENST00000550592 UBQLNLQ8IYU4 475 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 DHRSXQ8N5I4 330 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 OR51G2Q8NGK0 314 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 OR5L2Q8NGL0 311 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 OR4D5Q8NGN0 318 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 OR1F12Q8NHA8 337 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 PIGCQ92535 297 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 CLDN23Q96B33 292 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 SERAC1Q96JX3 654 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 NIPSNAP3BQ9BS92 247 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 EDEM2Q9BV94 578 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 NAT10Q9H0A0 1025 aaKnown RBP3.56□□□□□ -1.84
LIMA1-205ENST00000550592 Q9H3A6 140 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 ZNF385DQ9H6B1 395 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 SMYD3Q9H7B4 428 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 SMPD3Q9NY59 655 aaPredicted RBP3.56□□□□□ -1.84
LIMA1-205ENST00000550592 C6orf203Q9P0P8 240 aaPredicted RBP3.56□□□□□ -1.84
LIMA1-205ENST00000550592 PCSK1NQ9UHG2 260 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 LCMT1Q9UIC8 334 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 CLEC4EQ9ULY5 219 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 ERVW-1Q9UQF0 538 aa3.56□□□□□ -1.84
LIMA1-205ENST00000550592 CACNA1EQ15878 2313 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 KALRNO60229 2985 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 SPAG17Q6Q759 2223 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 AKAP13Q12802 2813 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 IGLV3-10A0A075B6K4 115 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 KLF18A0A0U1RQI7 1052 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 SULT2B1O00204 365 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 MPHOSPH10O00566 681 aaKnown RBP3.55□□□□□ -1.84
LIMA1-205ENST00000550592 PRRG1O14668 218 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 SNNO75324 88 aaPredicted RBP3.55□□□□□ -1.84
LIMA1-205ENST00000550592 LRATO95237 230 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 IGHV3-23P01764 117 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 TDGF1P13385 188 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 ZNF44P15621 663 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 GCKP35557 465 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 CHIT1Q13231 466 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 GANABQ14697 944 aaKnown RBP3.55□□□□□ -1.84
LIMA1-205ENST00000550592 FRA10AC1Q70Z53 315 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 MOB1BQ7L9L4 216 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 TRPM8Q7Z2W7 1104 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 TMEM110Q86TL2 294 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 DEFB124Q8NES8 71 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 FGGYQ96C11 551 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 ZNF670Q9BS34 389 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 SRXN1Q9BYN0 137 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 CHIAQ9BZP6 476 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 SLITRK2Q9H156 845 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 RHBGQ9H310 441 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 PRORYQ9H606 182 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 VCPKMTQ9H867 229 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 APMAPQ9HDC9 416 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 FANCFQ9NPI8 374 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 NANSQ9NR45 359 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 SLC17A5Q9NRA2 495 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 NUDT15Q9NV35 164 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 PRR34Q9NV39 138 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 ONECUT1Q9UBC0 465 aa3.55□□□□□ -1.84
LIMA1-205ENST00000550592 SLCO1B1Q9Y6L6 691 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms