RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 GP6Q9HCN6 339 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 AURKCQ9UQB9 309 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 AP4S1Q9Y587 144 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 A0A0B4J2E0 115 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 A0A1B0GWA3 101 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 A0A1B0GX12 115 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 TRAPPC13A5PLN9 417 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 ZNF814B7Z6K7 855 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 H3BNX3 289 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 J3KTA2 159 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 hCG_2039718K7EN88 272 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 OR5F1O95221 314 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 THY1P04216 161 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 SOD3P08294 240 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 THRBP10828 461 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 EDNRAP25101 427 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 OR3A2P47893 321 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 RAC3P60763 192 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 COPZ1P61923 177 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 BSPH1Q075Z2 132 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 ITGADQ13349 1161 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 PIN1Q13526 163 aaPredicted RBP11.85□□□□□ -0.51
NUP188-211ENST00000550219 DEF8Q6ZN54 512 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 MAPK1IP1LQ8NDC0 245 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 PIK3C3Q8NEB9 887 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 ZNF563Q8TA94 476 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 ADAMTS16Q8TE57 1224 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 DNAJA4Q8WW22 397 aaPredicted RBP11.85□□□□□ -0.51
NUP188-211ENST00000550219 PYDC1Q8WXC3 89 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 C3orf49Q96BT1 292 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 YY1AP1Q9H869 796 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 BCO1Q9HAY6 547 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 C12orf10Q9HB07 376 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 S100A14Q9HCY8 104 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 SERINC1Q9NRX5 453 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 ZNF701Q9NV72 531 aaPredicted RBP11.85□□□□□ -0.51
NUP188-211ENST00000550219 RIMS3Q9UJD0 308 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 MAGED1Q9Y5V3 778 aaPredicted RBP11.85□□□□□ -0.51
NUP188-211ENST00000550219 HEATR5AQ86XA9 2040 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 NAV3Q8IVL0 2385 aa11.85□□□□□ -0.51
NUP188-211ENST00000550219 CPSF4LA6NMK7 179 aaKnown RBP11.84□□□□□ -0.51
NUP188-211ENST00000550219 CYTIPO60759 359 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 IGHV3-9P01782 118 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 HTR3AP46098 478 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 YAP1P46937 504 aaKnown RBP11.84□□□□□ -0.51
NUP188-211ENST00000550219 DIO1P49895 249 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 HMGA2P52926 109 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 TNK1Q13470 666 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 P2RY6Q15077 328 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 PPA1Q15181 289 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 CLEC12BQ2HXU8 276 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 SYT14P1Q58G82 188 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 SWT1Q5T5J6 900 aaKnown RBP11.84□□□□□ -0.51
NUP188-211ENST00000550219 ULK3Q6PHR2 472 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 LINC00114Q6XXX2 140 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 Q6ZT83 130 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 GRINAQ7Z429 371 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 CYP4Z1Q86W10 505 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 ZNF100Q8IYN0 542 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 OFCC1Q8IZS5 231 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 LILRB1Q8NHL6 650 aaPredicted RBP11.84□□□□□ -0.51
NUP188-211ENST00000550219 HSD17B8Q92506 261 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 SLC38A4Q969I6 547 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 TRMT61AQ96FX7 289 aaKnown RBP11.84□□□□□ -0.51
NUP188-211ENST00000550219 SLC41A3Q96GZ6 507 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 NMNAT1Q9HAN9 279 aaPredicted RBP11.84□□□□□ -0.51
NUP188-211ENST00000550219 MAN2C1Q9NTJ4 1040 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 OSGIN1Q9UJX0 560 aa11.84□□□□□ -0.51
NUP188-211ENST00000550219 ING1Q9UK53 422 aaPredicted RBP11.84□□□□□ -0.51
NUP188-211ENST00000550219 FAM32AQ9Y421 112 aaKnown RBP11.84□□□□□ -0.51
NUP188-211ENST00000550219 A0A1W2PRQ8 180 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 KIAA1324LA8MWY0 1029 aaPredicted RBP11.83□□□□□ -0.52
NUP188-211ENST00000550219 RNF223E7ERA6 249 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 SULT2B1O00204 365 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 CHP2O43745 196 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 TMCC2O75069 709 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 DIRAS1O95057 198 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 MT-ND1P03886 318 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 PAX1P15863 534 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 CCNA2P20248 432 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 FUT4P22083 530 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 TACR3P29371 465 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 APOBEC1P41238 236 aaKnown RBP11.83□□□□□ -0.52
NUP188-211ENST00000550219 POLR2HP52434 150 aaKnown RBP11.83□□□□□ -0.52
NUP188-211ENST00000550219 MAP2K6P52564 334 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 CDH11P55287 796 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 CDH12P55289 794 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 TAS2R41P59536 307 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 CSNK2A1P68400 391 aaPredicted RBP11.83□□□□□ -0.52
NUP188-211ENST00000550219 ST3GAL3Q11203 375 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 DGCR6Q14129 220 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 ZNF672Q499Z4 452 aaPredicted RBP11.83□□□□□ -0.52
NUP188-211ENST00000550219 ABLIM2Q6H8Q1 611 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 OR2T5Q6IEZ7 315 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 SEZ6L2Q6UXD5 910 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 GALNT5Q7Z7M9 940 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 PRIMA1Q86XR5 153 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 ADGRG3Q86Y34 549 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 UBE2J2Q8N2K1 259 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 CADM2Q8N3J6 435 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms