RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 FCRLAQ7L513 359 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 CSNK1A1LQ8N752 337 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 C19orf47Q8N9M1 422 aaKnown RBP10.14□□□□□ -0.79
LINC00661-204ENST00000549354 SPERTQ8NA61 448 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 SCMH1Q96GD3 660 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 HS6ST2Q96MM7 605 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 RANBP3Q9H6Z4 567 aaPredicted RBP10.14□□□□□ -0.79
LINC00661-204ENST00000549354 FAM60AQ9NP50 221 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 ASB6Q9NWX5 421 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 RPS6KB2Q9UBS0 482 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 SRPX2O60687 465 aaPredicted RBP10.14□□□□□ -0.79
LINC00661-204ENST00000549354 HPGDP15428 266 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 HIST1H1CP16403 213 aaKnown RBP10.14□□□□□ -0.79
LINC00661-204ENST00000549354 HNRNPKP61978 463 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC00661-204ENST00000549354 CAMK2DQ13557 499 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 GSG1Q2KHT4 349 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 CDONQ4KMG0 1287 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 BEX5Q5H9J7 111 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 FAM198BQ6UWH4 519 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 CA13Q8N1Q1 262 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 OR52R1Q8NGF1 315 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 ELMOD3Q96FG2 381 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 RBP7Q96R05 134 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 HEXA-AS1Q9H8Q6 139 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 ELF5Q9UKW6 265 aaPredicted RBP10.14□□□□□ -0.79
LINC00661-204ENST00000549354 EML5Q05BV3 1969 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 FREM3P0C091 2139 aa10.14□□□□□ -0.79
LINC00661-204ENST00000549354 CDK2AP1O14519 115 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 ATP1B1P05026 303 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 TMIGD3P0DMS9 266 aaPredicted RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 RAD52P43351 418 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 FNTBP49356 437 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 EPHA4P54764 986 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 ZP1P60852 638 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 MELKQ14680 651 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 DCST2Q5T1A1 773 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 PYHIN1Q6K0P9 492 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 C11orf88Q6PI97 169 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 NHLRC1Q6VVB1 395 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 Q7L0L9 218 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 LIX1LQ8IVB5 337 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 MS4A15Q8N5U1 240 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 OR51Q1Q8NH59 317 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 ANGPTL6Q8NI99 470 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 LMX1AQ8TE12 382 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 TCTN2Q96GX1 697 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 TMEM138Q9NPI0 162 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 EPHA6Q9UF33 1036 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 CEP192Q8TEP8 1941 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 A0A087WV62 115 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 H0YC42 278 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 TRIM3O75382 744 aaPredicted RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 SBK2P0C263 348 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 MAOAP21397 527 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 RBMS1P29558 406 aaKnown RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 LCN1P31025 176 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 EIF1AXP47813 144 aaKnown RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 CXCL12P48061 93 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 DECR1Q16698 335 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 GARNL3Q5VVW2 1013 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 FGD2Q7Z6J4 655 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 RANBP3LQ86VV4 465 aaPredicted RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 OR52I2Q8NH67 350 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 NXPE2Q96DL1 559 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 KLHDC3Q9BQ90 382 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 GINS4Q9BRT9 223 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 ERVMER34-1Q9H9K5 563 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 MEPEQ9NQ76 525 aaPredicted RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 C12orf4Q9NQ89 552 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 DLL4Q9NR61 685 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 LRIT1Q9P2V4 623 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 MGAT4CQ9UBM8 478 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 EXOGQ9Y2C4 368 aaKnown RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 MED31Q9Y3C7 131 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 A0A0G2JK05 382 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 B8ZZF3 427 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 FLRT2O43155 660 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 TFP02787 698 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 GDI2P50395 445 aaKnown RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 MAP2K6P52564 334 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 ZNF85Q03923 595 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 HSF2Q03933 536 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 PUDPQ08623 228 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 GALEQ14376 348 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 STPG1Q5TH74 334 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 TMEM65Q6PI78 240 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 APOOLQ6UXV4 268 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 LRRC69Q6ZNQ3 347 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 NLRC3Q7RTR2 1065 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 MCATQ8IVS2 390 aaKnown RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 CMTM4Q8IZR5 234 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 THEM6Q8WUY1 208 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 ACOT12Q8WYK0 555 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 HOXB13Q92826 284 aaPredicted RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 RBM18Q96H35 190 aaKnown RBP10.13□□□□□ -0.79
LINC00661-204ENST00000549354 ARHGDIGQ99819 225 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 CA10Q9NS85 328 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
LINC00661-204ENST00000549354 PHF3Q92576 2039 aaKnown RBP10.12□□□□□ -0.79
LINC00661-204ENST00000549354 TCRBV16S1A1N1A0A5B0 115 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms