RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 PTDSS2Q9BVG9 487 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 NXF2Q9GZY0 626 aaKnown RBP12.99□□□□□ -0.33
CACNB3-209ENST00000548860 TRPV4Q9HBA0 871 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 SIGLEC5O15389 551 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 AKR1C4P17516 323 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 FAUP35544 74 aaKnown RBP12.99□□□□□ -0.33
CACNB3-209ENST00000548860 SIGLEC14Q08ET2 396 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 SMUG1Q53HV7 270 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 TCTE1Q5JU00 501 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 TMEM92Q6UXU6 159 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 CFAP77Q6ZQR2 320 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 PMM1Q92871 262 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 C19orf43Q9BQ61 176 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 RANBP3Q9H6Z4 567 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-209ENST00000548860 WDR76Q9H967 626 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 UBQLN2Q9UHD9 624 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 POLHQ9Y253 713 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 RPH3AQ9Y2J0 694 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-209ENST00000548860 MAB21L2Q9Y586 359 aa12.99□□□□□ -0.33
CACNB3-209ENST00000548860 SHISA8B8ZZ34 492 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ALX3O95076 343 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 TMIGD3P0DMS9 266 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-209ENST00000548860 SPI1P17947 270 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 SFTPDP35247 375 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 SLC6A9P48067 706 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 CSNK1EP49674 416 aaKnown RBP12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ACTA2P62736 377 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ACTG2P63267 376 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 SCRN3Q0VDG4 424 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 DUSP8Q13202 625 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 B3GNTL1Q67FW5 361 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF687Q8N1G0 1237 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ZFAND1Q8TCF1 268 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF471Q9BX82 626 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-209ENST00000548860 C12orf4Q9NQ89 552 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 GSKIPQ9P0R6 139 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 SLC17A4Q9Y2C5 497 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 MYO15AQ9UKN7 3530 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 A0A1W2PPL8 197 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ERVH48-1M5A8F1 160 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 GP1BBP13224 206 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 AKR1C2P52895 323 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 AKR1C1Q04828 323 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ZIC1Q15915 447 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ST3GAL2Q16842 350 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 CDNFQ49AH0 187 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 FAM109AQ8N4B1 249 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 MOGAT1Q96PD6 335 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 GPR89AB7ZAQ6 455 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 C1QBP02746 253 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 GPR89BP0CG08 455 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 CDK2P24941 298 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF136P52737 540 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 CLDN20P56880 219 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 GMFBP60983 142 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 LTBQ06643 244 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-209ENST00000548860 C17orf107Q6ZR85 190 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 OR5D18Q8NGL1 313 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 TMEM41AQ96HV5 264 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 C20orf85Q9H1P6 137 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 PDE7BQ9NP56 450 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 POLMQ9NP87 494 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-209ENST00000548860 KLRF1Q9NZS2 232 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 TRAPPC4Q9Y296 219 aa12.98□□□□□ -0.33
CACNB3-209ENST00000548860 SERINC4A6NH21 518 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 G3V3Y1 287 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ZFPL1O95159 310 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 UBL4AP11441 157 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 EPXP11678 715 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF250P15622 560 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF28P17035 718 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 PTGS2P35354 604 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 GARNL3Q5VVW2 1013 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 NHLRC1Q6VVB1 395 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 MDGA2Q7Z553 956 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF321PQ8N8H1 164 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 G6PC3Q9BUM1 346 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 GON7Q9BXV9 100 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 PFDN2Q9UHV9 154 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 MDC1Q14676 2089 aaKnown RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 A0A1B0GV50 99 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 CHP2O43745 196 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 GALR3O60755 368 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 PSMB1P20618 241 aaKnown RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 HTRA4P83105 476 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 SORDQ00796 357 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF85Q03923 595 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 RELL2Q8NC24 303 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 NXF5Q9H1B4 397 aaKnown RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 PPP1R3EQ9H7J1 279 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ADGRL4Q9HBW9 690 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 CES1P1Q9UKY3 287 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 YBX2Q9Y2T7 364 aaKnown RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF593O00488 134 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 TEKQ02763 1124 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ARFRP1Q13795 201 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 FCRL6Q6DN72 434 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms