RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 AMBRA1Q9C0C7 1298 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 PIF1Q9H611 641 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 TMEM27Q9HBJ8 222 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 SLC52A3Q9NQ40 469 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 SELENONQ9NZV5 590 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 SLC13A4Q9UKG4 626 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ABCA2Q9BZC7 2435 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 NAV3Q8IVL0 2385 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 TRAV36DV7A0A075B6V5 113 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 PRORSD1PA6NEY8 169 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 OR6C65A6NJZ3 312 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 M0QX08 132 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 AIM2O14862 343 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 TLX2O43763 284 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-211ENST00000547950 CD5LO43866 347 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 SERPINB7O75635 380 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 CRYAAP02489 173 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 NQO1P15559 274 aaKnown RBP5.84□□□□□ -1.47
SCAF11-211ENST00000547950 HOXB9P17482 250 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-211ENST00000547950 HTR2AP28223 471 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 GRPRP30550 384 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 PRKAR1BP31321 381 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 SERPINF1P36955 418 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 CAPZA2P47755 286 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 MRPL19P49406 292 aaKnown RBP5.84□□□□□ -1.47
SCAF11-211ENST00000547950 EFNA4P52798 201 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 NCALDP61601 193 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 PMS2P3Q13401 168 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 SCARB2Q14108 478 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 SQLEQ14534 574 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 OR1Q1Q15612 314 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 ADRM1Q16186 407 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 CARTPTQ16568 116 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 MST1LQ2TV78 715 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 TTMPQ5BVD1 217 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 NKAPLQ5M9Q1 402 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 CARD17Q5XLA6 110 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 ULK3Q6PHR2 472 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 DHRS4L2Q6PKH6 230 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 DLEU7Q6UYE1 221 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 NET1Q7Z628 596 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-211ENST00000547950 ARMC8Q8IUR7 673 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 LSMEM1Q8N8F7 131 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 SMYD1Q8NB12 490 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 OR10H5Q8NGA6 315 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 DNAJA4Q8WW22 397 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-211ENST00000547950 FAM168AQ92567 244 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 SLC38A4Q969I6 547 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 SLC35B4Q969S0 331 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 SLC47A1Q96FL8 570 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 SLC38A2Q96QD8 506 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 ZNF607Q96SK3 696 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 VRK1Q99986 396 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-211ENST00000547950 WFDC6Q9BQY6 131 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 EMC6Q9BV81 110 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 RABEP2Q9H5N1 569 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 IKZF5Q9H5V7 419 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 GPR35Q9HC97 309 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 OBP2BQ9NPH6 170 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 INTS9Q9NV88 658 aaKnown RBP5.84□□□□□ -1.47
SCAF11-211ENST00000547950 NDUFAF1Q9Y375 327 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 USF3Q68DE3 2245 aa5.84□□□□□ -1.47
SCAF11-211ENST00000547950 FN1P02751 2386 aaKnown RBP5.84□□□□□ -1.48
SCAF11-211ENST00000547950 IGKV1D-42A0A075B6H8 117 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 A0A087WUJ7 227 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 TRBV5-3A0A0A0MS03 114 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 A8MV72 311 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-211ENST00000547950 LRRN3E7EW58 273 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 MS4A18H0YCH9 400 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 H7C417 338 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 M0R3G1 203 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 TPST2O60704 377 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 SEC14L2O76054 403 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF432O94892 652 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 MFN2O95140 757 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 HPRP00739 348 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 OR4A8P0C604 315 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 CECR9P0C854 216 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 HLA-DOBP13765 273 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 GPX2P18283 190 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 AHCYP23526 432 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 ATP4BP51164 291 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 CDH12P55289 794 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 RGS8P57771 180 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-211ENST00000547950 MTPNP58546 118 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 SNRPD2P62316 118 aaKnown RBP5.83□□□□□ -1.48
SCAF11-211ENST00000547950 NAAAQ02083 359 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 PIGFQ07326 219 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 CYP51A1Q16850 503 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 SWI5Q1ZZU3 235 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 CEACAM16Q2WEN9 425 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 MS4A18Q3C1V0 323 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 RUNDC3AQ59EK9 446 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 PHYHD1Q5SRE7 291 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 C1QTNF12Q5T7M4 302 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 FAM69AQ5T7M9 428 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 C5orf46Q6UWT4 87 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 C6orf89Q6UWU4 347 aa5.83□□□□□ -1.48
SCAF11-211ENST00000547950 SLC46A3Q7Z3Q1 461 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms