RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 SPATA3Q8NHX4 192 aa12.43□□□□□ -0.42
TROAP-203ENST00000546735 MAGEE2Q8TD90 523 aaPredicted RBP12.43□□□□□ -0.42
TROAP-203ENST00000546735 PROX1Q92786 737 aa12.43□□□□□ -0.42
TROAP-203ENST00000546735 CCDC28BQ9BUN5 200 aa12.43□□□□□ -0.42
TROAP-203ENST00000546735 EMC6Q9BV81 110 aa12.43□□□□□ -0.42
TROAP-203ENST00000546735 C12orf10Q9HB07 376 aa12.43□□□□□ -0.42
TROAP-203ENST00000546735 KLHL14Q9P2G3 628 aa12.43□□□□□ -0.42
TROAP-203ENST00000546735 RNF212BA8MTL3 300 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 MS4A18H0YCH9 400 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 RPL36A-HNRNPH2H7BZ11 118 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 M0R3G1 203 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 TRAF3IP2O43734 574 aaPredicted RBP12.42□□□□□ -0.42
TROAP-203ENST00000546735 OR2T1O43869 369 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 TPST2O60704 377 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 FZD7O75084 574 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 IGLV1-44P01699 117 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 CSF3P09919 207 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 NQO1P15559 274 aaKnown RBP12.42□□□□□ -0.42
TROAP-203ENST00000546735 USF1P22415 310 aaPredicted RBP12.42□□□□□ -0.42
TROAP-203ENST00000546735 CAPZA2P47755 286 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 PDLIM4P50479 330 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 IDH3GP51553 393 aaPredicted RBP12.42□□□□□ -0.42
TROAP-203ENST00000546735 RGS8P57771 180 aaPredicted RBP12.42□□□□□ -0.42
TROAP-203ENST00000546735 LSM11P83369 360 aaKnown RBP eCLIP12.42□□□□□ -0.42
TROAP-203ENST00000546735 HGFACQ04756 655 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 OR1Q1Q15612 314 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 MS4A18Q3C1V0 323 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 TTMPQ5BVD1 217 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 CYB5R2Q6BCY4 276 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 ULK3Q6PHR2 472 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 SLC46A3Q7Z3Q1 461 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 KRT73Q86Y46 540 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 WDFY1Q8IWB7 410 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 TMEM123Q8N131 208 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 ARIH2OSQ8N7S6 290 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 SLC47A1Q96FL8 570 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 THOC1Q96FV9 657 aaKnown RBP12.42□□□□□ -0.42
TROAP-203ENST00000546735 OR2M2Q96R28 347 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 SPATA5L1Q9BVQ7 753 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 CRLF2Q9HC73 371 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.42□□□□□ -0.42
TROAP-203ENST00000546735 FKBP7Q9Y680 259 aa12.42□□□□□ -0.42
TROAP-203ENST00000546735 FBN1P35555 2871 aaKnown RBP12.42□□□□□ -0.42
TROAP-203ENST00000546735 HEATR1Q9H583 2144 aaKnown RBP12.41□□□□□ -0.42
TROAP-203ENST00000546735 A0A087WUJ7 227 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 VWC2LB2RUY7 222 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 B9A039 149 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 IFNA2P01563 188 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 IGKV3-15P01624 115 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 BGLAPP02818 100 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 CBR1P16152 277 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 PPIBP23284 216 aaKnown RBP12.41□□□□□ -0.42
TROAP-203ENST00000546735 SLC6A2P23975 617 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 THBS4P35443 961 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 SH3BGRP55822 239 aaPredicted RBP12.41□□□□□ -0.42
TROAP-203ENST00000546735 NCALDP61601 193 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 NPRL3Q12980 569 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 ADRM1Q16186 407 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 MDP1Q86V88 176 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 UEVLDQ8IX04 471 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 PHC2Q8IXK0 858 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 ZCCHC24Q8N2G6 241 aaKnown RBP12.41□□□□□ -0.42
TROAP-203ENST00000546735 SMYD1Q8NB12 490 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 PIK3C3Q8NEB9 887 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 DNAJA4Q8WW22 397 aaPredicted RBP12.41□□□□□ -0.42
TROAP-203ENST00000546735 TXNDC15Q96J42 360 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 FOXN4Q96NZ1 517 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 MOGAT1Q96PD6 335 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 ZNF317Q96PQ6 595 aaPredicted RBP12.41□□□□□ -0.42
TROAP-203ENST00000546735 CPPED1Q9BRF8 314 aaPredicted RBP12.41□□□□□ -0.42
TROAP-203ENST00000546735 PIMREGQ9BSJ6 248 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 TMEM38AQ9H6F2 299 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 TMEM27Q9HBJ8 222 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 MED29Q9NX70 200 aa12.41□□□□□ -0.42
TROAP-203ENST00000546735 TESQ9UGI8 421 aaKnown RBP12.41□□□□□ -0.42
TROAP-203ENST00000546735 A0A0B4J2E0 115 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 IGHV4-61A0A0C4DH41 118 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 A0A1B0GX12 115 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 EVPLLA8MZ36 301 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 M0R3H8 397 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 SERPINI2O75830 405 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 OPN1SWP03999 348 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
TROAP-203ENST00000546735 GPX2P18283 190 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 NR4A2P43354 598 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 CDH12P55289 794 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 POU3F1Q03052 451 aaPredicted RBP12.4□□□□□ -0.42
TROAP-203ENST00000546735 SELPLGQ14242 412 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 SQLEQ14534 574 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 EFNB3Q15768 340 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 C3orf36Q3SXR2 165 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 RUNDC3AQ59EK9 446 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 FAM91A1Q658Y4 838 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 C5orf46Q6UWT4 87 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 DLEU7Q6UYE1 221 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 IL17RELQ6ZVW7 336 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 SPATA21Q7Z572 469 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 NET1Q7Z628 596 aaPredicted RBP12.4□□□□□ -0.42
TROAP-203ENST00000546735 ARMC8Q8IUR7 673 aa12.4□□□□□ -0.42
TROAP-203ENST00000546735 C10orf53Q8N6V4 93 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms