RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 KDM8Q8N371 416 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 ANKFN1Q8N957 763 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 NOA1Q8NC60 698 aaKnown RBP10.91□□□□□ -0.66
SCAF11-208ENST00000546534 OR4M2Q8NGB6 313 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 KIF18AQ8NI77 898 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 C1QTNF5Q9BXJ0 243 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 SLC38A1Q9H2H9 487 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 GPR35Q9HC97 309 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 FZR1Q9UM11 496 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 RASD1Q9Y272 281 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 CORINQ9Y5Q5 1042 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 A8MVM7 634 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 J3QLI3 93 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 RNASET2O00584 256 aaKnown RBP10.9□□□□□ -0.66
SCAF11-208ENST00000546534 TRIM13O60858 407 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 DEAF1O75398 565 aaPredicted RBP10.9□□□□□ -0.66
SCAF11-208ENST00000546534 PRSS23O95084 383 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 FSHBP01225 129 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 C1QCP02747 245 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 NAT2P11245 290 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 UQCRC2P22695 453 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 FPR2P25090 351 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 ZFP36P26651 326 aaKnown RBP10.9□□□□□ -0.66
SCAF11-208ENST00000546534 HPCAP84074 193 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 MVKQ03426 396 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 ZP4Q12836 540 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 SYPL1Q16563 259 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 MRPL2Q5T653 305 aaKnown RBP10.9□□□□□ -0.66
SCAF11-208ENST00000546534 AVPI1Q5T686 147 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 C1orf140Q5VVS0 124 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 DCAF12L2Q5VW00 463 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 SAXO2Q658L1 398 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 ANKRD46Q86W74 232 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.66
SCAF11-208ENST00000546534 DVL3Q92997 716 aaPredicted RBP10.9□□□□□ -0.66
SCAF11-208ENST00000546534 UNKLQ9H9P5 680 aaKnown RBP10.9□□□□□ -0.66
SCAF11-208ENST00000546534 NTN4Q9HB63 628 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 B3GNT2Q9NY97 397 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 OPN4Q9UHM6 478 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 RCE1Q9Y256 329 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 NOX1Q9Y5S8 564 aa10.9□□□□□ -0.66
SCAF11-208ENST00000546534 HMGN4O00479 90 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 COPEO14579 308 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 CDC14BO60729 498 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 SLC43A1O75387 559 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 CPSF4O95639 269 aaKnown RBP10.89□□□□□ -0.67
SCAF11-208ENST00000546534 HLA-HP01893 362 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 TFPTP0C1Z6 253 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 GKN3PP0CG01 181 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF35P13682 527 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 UQCRBP14927 111 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF14P17017 642 aaPredicted RBP10.89□□□□□ -0.67
SCAF11-208ENST00000546534 GLRXP35754 106 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 CLDN8P56748 225 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 FXNQ16595 210 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 TRMT5Q32P41 509 aaKnown RBP10.89□□□□□ -0.67
SCAF11-208ENST00000546534 CNPY4Q8N129 248 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 GPR137CQ8N3F9 429 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 SIGLECL1Q8N7X8 197 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 NEURL3Q96EH8 262 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF75AQ96N20 296 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 DUX5Q96PT3 197 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 TRNT1Q96Q11 434 aaKnown RBP10.89□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF385DQ9H6B1 395 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 C7orf69Q9H7B7 122 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 RLIMQ9NVW2 624 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 DUSP13Q9UII6 198 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 MID2Q9UJV3 735 aa10.89□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF99A8MXY4 864 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-208ENST00000546534 FTCDNL1E5RQL4 147 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 NPHS1O60500 1241 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 NPIPB7O75200 414 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 PNMTP11086 282 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 IL7RP16871 459 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF43P17038 809 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 RPS4Y1P22090 263 aaKnown RBP10.88□□□□□ -0.67
SCAF11-208ENST00000546534 PRTN3P24158 256 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 ALDH3A1P30838 453 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 CHI3L1P36222 383 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-208ENST00000546534 ACAA2P42765 397 aaKnown RBP10.88□□□□□ -0.67
SCAF11-208ENST00000546534 MAGEB1P43366 347 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 PIGFQ07326 219 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 GNA13Q14344 377 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 GSG1Q2KHT4 349 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 GKAP1Q5VSY0 366 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-208ENST00000546534 GSPT2Q8IYD1 628 aaKnown RBP10.88□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF440Q8IYI8 595 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 CADM2Q8N3J6 435 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 OR8J2Q8NGG1 315 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 SLC25A36Q96CQ1 311 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 TUBGCP3Q96CW5 907 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 LRRC58Q96CX6 371 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 RAB39BQ96DA2 213 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 DPY30Q9C005 99 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 MTHFD2LQ9H903 347 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-208ENST00000546534 SEC14L4Q9UDX3 406 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 MARCOQ9UEW3 520 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-208ENST00000546534 ZDHHC2Q9UIJ5 367 aa10.88□□□□□ -0.67
SCAF11-208ENST00000546534 PRSS51A0A1B0GVH4 220 aa10.87□□□□□ -0.67
SCAF11-208ENST00000546534 A0A1W2PPW3 197 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms