RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 EDDM13A0A1B0GTR0 161 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 ARRDC5A6NEK1 342 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 ATP1B1P05026 303 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 PI3P19957 117 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 BTN2A1Q7KYR7 527 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 FBXO17Q96EF6 278 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 CPNE7Q9UBL6 633 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 ACAD8Q9UKU7 415 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 C2orf72A6NCS6 295 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 C1QTNF3-AMACRE9PGA6 284 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 CASC3O15234 703 aaKnown RBP13.43□□□□□ -0.26
HOXC11-202ENST00000546378 ECDO95905 644 aaPredicted RBP13.43□□□□□ -0.26
HOXC11-202ENST00000546378 CD3DP04234 171 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 EIF2B1Q14232 305 aaKnown RBP13.43□□□□□ -0.26
HOXC11-202ENST00000546378 METRNLQ641Q3 311 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 MDGA2Q7Z553 956 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 KCTD20Q7Z5Y7 419 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 JAZF1Q86VZ6 243 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 OR9A4Q8NGU2 314 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 OR10K1Q8NGX5 313 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 THAP3Q8WTV1 239 aaPredicted RBP13.43□□□□□ -0.26
HOXC11-202ENST00000546378 MARC2Q969Z3 335 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF514Q96K75 400 aaPredicted RBP13.43□□□□□ -0.26
HOXC11-202ENST00000546378 SLC22A13Q9Y226 551 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 AKR1C4P17516 323 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 NDUFS1P28331 727 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 C21orf58P58505 322 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 ELOAQ14241 798 aaKnown RBP13.43□□□□□ -0.26
HOXC11-202ENST00000546378 MEP1BQ16820 701 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 GAB4Q2WGN9 574 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 DGAT2L6Q6ZPD8 337 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 NUDT18Q6ZVK8 323 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF563Q8TA94 476 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 PHOSPHO1Q8TCT1 267 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 CDCA3Q99618 268 aaPredicted RBP13.43□□□□□ -0.26
HOXC11-202ENST00000546378 PRSS16Q9NQE7 514 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 PHPT1Q9NRX4 125 aaPredicted RBP13.43□□□□□ -0.26
HOXC11-202ENST00000546378 SLC35A3Q9Y2D2 325 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 SPACA6W5XKT8 324 aa13.43□□□□□ -0.26
HOXC11-202ENST00000546378 MED19A0JLT2 244 aaPredicted RBP13.42□□□□□ -0.26
HOXC11-202ENST00000546378 B3GALT2O43825 422 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 CTSVO60911 334 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 RBBP9O75884 186 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 RRASP10301 218 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 SPOCK1Q08629 439 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 LRFN4Q6PJG9 635 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 TMUB2Q71RG4 321 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 FAM220AQ7Z4H9 259 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 PAQR7Q86WK9 346 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 LRRC46Q96FV0 321 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 CMKLR1Q99788 373 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 HPF1Q9NWY4 346 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 LRIT1Q9P2V4 623 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 POMT2Q9UKY4 750 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 MEIKINA0A087WXM9 373 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 OR6C68A6NDL8 312 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 H2BFSP57053 126 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 DECR1Q16698 335 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 ARHGAP40Q5TG30 622 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 FCRL6Q6DN72 434 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 RAB12Q6IQ22 244 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 CD200R1LQ6Q8B3 271 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 SHISA6Q6ZSJ9 500 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 ACBD4Q8NC06 268 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 BRIX1Q8TDN6 353 aaKnown RBP13.42□□□□□ -0.26
HOXC11-202ENST00000546378 RBM18Q96H35 190 aaKnown RBP13.42□□□□□ -0.26
HOXC11-202ENST00000546378 TIMP4Q99727 224 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 SLITRK2Q9H156 845 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 CENPMQ9NSP4 180 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 V9GY05 133 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 A0A0G2JK05 382 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 C5orf51A6NDU8 294 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 OR6A2O95222 327 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 AMY2AP04746 511 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 MC2RQ01718 297 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF33BQ06732 778 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 LIPNQ5VXI9 398 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 OR7E24Q6IFN5 339 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 GSG1LQ6UXU4 331 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 CBLN2Q8IUK8 224 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 MUC20Q8N307 709 aaPredicted RBP13.42□□□□□ -0.26
HOXC11-202ENST00000546378 TOR1AIP2Q8NFQ8 470 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 RERGQ96A58 199 aaPredicted RBP13.42□□□□□ -0.26
HOXC11-202ENST00000546378 NCDNQ9UBB6 729 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 SIGLEC7Q9Y286 467 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 SLC27A6Q9Y2P4 619 aa13.42□□□□□ -0.26
HOXC11-202ENST00000546378 FREM3P0C091 2139 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 TRAV8-7A0A075B6U6 113 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 SLC22A23A1A5C7 686 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 DUXAA6NLW8 204 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 F5H0A9 414 aaPredicted RBP13.41□□□□□ -0.26
HOXC11-202ENST00000546378 HCRTR1O43613 425 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 PPM1BO75688 479 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 CSTAP01040 98 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 SPARCP09486 303 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 GLI4P10075 376 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 P2RX1P51575 399 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF136P52737 540 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 CTXN1P60606 82 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 BIKQ13323 160 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms