RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PARPBPQ9NWS1 579 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 LYVE1Q9Y5Y7 322 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 CIB2O75838 187 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 HLA-DOBP13765 273 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 IGFBP2P18065 325 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 UQCRC1P31930 480 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 IL1RL1Q01638 556 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 CCNIQ14094 377 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 OR2T5Q6IEZ7 315 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 CASP12Q6UXS9 341 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 TMPRSS11FQ6ZWK6 438 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 PXKQ7Z7A4 578 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 ZNF100Q8IYN0 542 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 ACBD4Q8NC06 268 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 PAPD5Q8NDF8 572 aaKnown RBP18.13■□□□□ 0.49
HMGA2-211ENST00000545998 OR4K5Q8NGD3 323 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 OR2T29Q8NH02 315 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 APH1AQ96BI3 265 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 ALPK1Q96QP1 1244 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 CCM2LQ9NUG4 571 aaPredicted RBP18.13■□□□□ 0.49
HMGA2-211ENST00000545998 NOX1Q9Y5S8 564 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 TRAF3IP2O43734 574 aaPredicted RBP18.13■□□□□ 0.49
HMGA2-211ENST00000545998 OR6A2O95222 327 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 AHCYP23526 432 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 OMPP47874 163 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 PCYT1AP49585 367 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 C1DQ13901 141 aaKnown RBP18.13■□□□□ 0.49
HMGA2-211ENST00000545998 EXOC3L2Q2M3D2 409 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 BEND4Q6ZU67 534 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 UEVLDQ8IX04 471 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 CDK20Q8IZL9 346 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 RSRC1Q96IZ7 334 aaKnown RBP18.13■□□□□ 0.49
HMGA2-211ENST00000545998 VNN3Q9NY84 501 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 ELOVL5Q9NYP7 299 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 PRSS50Q9UI38 385 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 TMEM5Q9Y2B1 443 aa18.13■□□□□ 0.49
HMGA2-211ENST00000545998 C11orf98E9PRG8 122 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 BLOC1S5-TXNDC5H3BN57 136 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 CDC42EP2O14613 210 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 SAGP10523 405 aaPredicted RBP18.12■□□□□ 0.49
HMGA2-211ENST00000545998 CD79BP40259 229 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 GPR4P46093 362 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 RPS4XP62701 263 aaKnown RBP18.12■□□□□ 0.49
HMGA2-211ENST00000545998 POU3F1Q03052 451 aaPredicted RBP18.12■□□□□ 0.49
HMGA2-211ENST00000545998 RPL18Q07020 188 aaKnown RBP18.12■□□□□ 0.49
HMGA2-211ENST00000545998 SP5Q6BEB4 398 aaPredicted RBP18.12■□□□□ 0.49
HMGA2-211ENST00000545998 AAED1Q7RTV5 226 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 GABRG1Q8N1C3 465 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 OR4C15Q8NGM1 316 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 FAM46AQ96IP4 442 aaKnown RBP18.12■□□□□ 0.49
HMGA2-211ENST00000545998 ENKD1Q9H0I2 346 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 TMCC3Q9ULS5 477 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 HIF3AQ9Y2N7 669 aa18.12■□□□□ 0.49
HMGA2-211ENST00000545998 EFCAB9A8MZ26 197 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 TNFRSF11BO00300 401 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 RNF13O43567 381 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 FKBP6O75344 327 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 CNOT4O95628 575 aaKnown RBP18.11■□□□□ 0.49
HMGA2-211ENST00000545998 CST1P01037 141 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 POU2F1P14859 743 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 COL8A1P27658 744 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 AQP2P41181 271 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 CLDN17P56750 224 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 FAM27E3Q08E93 113 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 FHL1Q13642 323 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 Q6ZT83 130 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 ANKK1Q8NFD2 765 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 YY1AP1Q9H869 796 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 RCE1Q9Y256 329 aa18.11■□□□□ 0.49
HMGA2-211ENST00000545998 KLF4O43474 513 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 ZNF432O94892 652 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 IGHV3-9P01782 118 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 SLC9A3P48764 834 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 SELENOPP49908 381 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 SORDQ00796 357 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 NIPAL3Q6P499 406 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 ZER1Q7Z7L7 766 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 OAFQ86UD1 273 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 OR13C2Q8NGS9 318 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 TXNDC15Q96J42 360 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 REEP1Q9H902 201 aa18.1■□□□□ 0.49
HMGA2-211ENST00000545998 KRCC1Q9NPI7 259 aaPredicted RBP18.1■□□□□ 0.49
HMGA2-211ENST00000545998 TRAV27A0A087WT01 109 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 OR10H3O60404 316 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 PPP1R8Q12972 351 aaKnown RBP18.09■□□□□ 0.49
HMGA2-211ENST00000545998 LAPTM4AQ15012 233 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 ANKDD1AQ495B1 522 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 FBXW9Q5XUX1 488 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 STAC2Q6ZMT1 411 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 KIF18BQ86Y91 864 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 DMRTC2Q8IXT2 367 aaPredicted RBP18.09■□□□□ 0.49
HMGA2-211ENST00000545998 MOSPD2Q8NHP6 518 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 DUS3LQ96G46 650 aaKnown RBP18.09■□□□□ 0.49
HMGA2-211ENST00000545998 GPA33Q99795 319 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 SPOCK3Q9BQ16 436 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 SLCO5A1Q9H2Y9 848 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 MED29Q9NX70 200 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 MALT1Q9UDY8 824 aa18.09■□□□□ 0.49
HMGA2-211ENST00000545998 SAMHD1Q9Y3Z3 626 aaKnown RBP18.09■□□□□ 0.49
HMGA2-211ENST00000545998 UNC79Q9P2D8 2635 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms