RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PPP1R3DO95685 299 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 GSTP1P09211 210 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 POU3F3P20264 500 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 IMPA1P29218 277 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SRSF5Q13243 272 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 TSTQ16762 297 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 HES5Q5TA89 166 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 FAM111BQ6SJ93 734 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF704Q6ZNC4 412 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ZFAND1Q8TCF1 268 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 TMEM239Q8WW34 195 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 TRIB1Q96RU8 372 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PFDN5Q99471 154 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 C1QTNF6Q9BXI9 259 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PINK1Q9BXM7 581 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 NRSN2Q9GZP1 204 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SLC23A1Q9UHI7 598 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 TRBV5-4A0A0C4DH59 114 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PRAMEF25A6NGN4 478 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF814B7Z6K7 855 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 M0R233 179 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SMAD9O15198 467 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 AIFM1O95831 613 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 CKMT1AP12532 417 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 AVPR2P30518 371 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SRP14P37108 136 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ATP4BP51164 291 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 TATDN3Q17R31 274 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 YIF1BQ5BJH7 314 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 HAGHLQ6PII5 290 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ST7LQ8TDW4 575 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 MAL2Q969L2 176 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ST6GAL2Q96JF0 529 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 FUZQ9BT04 418 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 TINAGL1Q9GZM7 467 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 GHITMQ9H3K2 345 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 FBXO8Q9NRD0 319 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 NOTCH4Q99466 2003 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SPAARA0A1B0GVQ0 90 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 A0A1W2PQF6 199 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 TCRBV3S1A0A5B6 114 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 F8W036 122 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 TRAPPC2LH3BP13 241 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SHOXO15266 292 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 EIF4EP06730 217 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 RETP07949 1114 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 MYF5P13349 255 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SSTR4P31391 388 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 UCNP55089 124 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 DPTQ07507 201 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ELAVL1Q15717 326 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PLBD1Q6P4A8 553 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SH2D5Q6ZV89 423 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 CADM4Q8NFZ8 388 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 OR4K15Q8NH41 348 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 IL1F10Q8WWZ1 152 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 RBPMSQ93062 196 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF566Q969W8 418 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 FAM46BQ96A09 425 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 S100PBPQ96BU1 408 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PDLIM5Q96HC4 596 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 LRR1Q96L50 414 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 BARD1Q99728 777 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 GNG12Q9UBI6 72 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PCDHA9Q9Y5H5 950 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 A0A1B0GVC2 190 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 OR2AT4A6NND4 320 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 H7C417 338 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ENSAO43768 121 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ALDOBP05062 364 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SEC61A1P61619 476 aaKnown RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 CCL7P80098 99 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PIN1Q13526 163 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SLC5A12Q1EHB4 618 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PYCR3Q53H96 274 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PLCXD3Q63HM9 321 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 AWAT2Q6E213 333 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 LRRC18Q8N456 261 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 OR2I1PQ8NGU4 316 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 PRR7Q8TB68 274 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SFXN5Q8TD22 340 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SCGB1C1Q8TD33 95 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SLCO4A1Q96BD0 722 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 CCDC115Q96NT0 180 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 MNTQ99583 582 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 TCEAL2Q9H3H9 227 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-218ENST00000545889 ACOXLQ9NUZ1 547 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 NPAP1Q9NZP6 1156 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 SPTBP11277 2137 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 GAPDHSO14556 408 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 UBFD1O14562 309 aaKnown RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CDRT1O95170 752 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MPIG6BO95866 241 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SFTPCP11686 197 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MAOAP21397 527 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 KIR2DL3P43628 341 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TNFRSF17Q02223 184 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TEKQ02763 1124 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SF3A2Q15428 464 aaKnown RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 Q3ZCU0 254 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms