RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 LINC01590Q5TEZ4 76 aa8□□□□□ -1.13
TDP1-204ENST00000545686 KIRREL2Q6UWL6 708 aa8□□□□□ -1.13
TDP1-204ENST00000545686 VITQ6UXI7 678 aa8□□□□□ -1.13
TDP1-204ENST00000545686 SLC16A9Q7RTY1 509 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ZNF227Q86WZ6 799 aa8□□□□□ -1.13
TDP1-204ENST00000545686 OR6K6Q8NGW6 343 aa8□□□□□ -1.13
TDP1-204ENST00000545686 OR6N1Q8NGY5 312 aa8□□□□□ -1.13
TDP1-204ENST00000545686 SPPL3Q8TCT6 385 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ASB16Q96NS5 453 aa8□□□□□ -1.13
TDP1-204ENST00000545686 CCNL2Q96S94 520 aaPredicted RBP8□□□□□ -1.13
TDP1-204ENST00000545686 NMNAT3Q96T66 252 aa8□□□□□ -1.13
TDP1-204ENST00000545686 LMAN2LQ9H0V9 348 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ZC4H2Q9NQZ6 224 aa8□□□□□ -1.13
TDP1-204ENST00000545686 RXFP3Q9NSD7 469 aa8□□□□□ -1.13
TDP1-204ENST00000545686 OBP2AQ9NY56 170 aa8□□□□□ -1.13
TDP1-204ENST00000545686 PCOLCE2Q9UKZ9 415 aa8□□□□□ -1.13
TDP1-204ENST00000545686 MOKQ9UQ07 419 aa8□□□□□ -1.13
TDP1-204ENST00000545686 SLC6A5Q9Y345 797 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ADAM18Q9Y3Q7 739 aa8□□□□□ -1.13
TDP1-204ENST00000545686 TMEM131Q92545 1883 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ARHGEF17Q96PE2 2063 aaPredicted RBP8□□□□□ -1.13
TDP1-204ENST00000545686 A0A087WUJ7 227 aa8□□□□□ -1.13
TDP1-204ENST00000545686 SLC22A23A1A5C7 686 aa8□□□□□ -1.13
TDP1-204ENST00000545686 PRSS38A1L453 326 aa8□□□□□ -1.13
TDP1-204ENST00000545686 PYCARD-AS1I3L0S3 204 aa8□□□□□ -1.13
TDP1-204ENST00000545686 TOR1AO14656 332 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ARPC5O15511 151 aa8□□□□□ -1.13
TDP1-204ENST00000545686 RBBP9O75884 186 aa8□□□□□ -1.13
TDP1-204ENST00000545686 CBX7O95931 251 aa8□□□□□ -1.13
TDP1-204ENST00000545686 LPLP06858 475 aa8□□□□□ -1.13
TDP1-204ENST00000545686 HOXC4P09017 264 aaPredicted RBP8□□□□□ -1.13
TDP1-204ENST00000545686 CT62P0C5K7 136 aa8□□□□□ -1.13
TDP1-204ENST00000545686 VSIG10L2P0DP72 767 aa8□□□□□ -1.13
TDP1-204ENST00000545686 APEHP13798 732 aaKnown RBP8□□□□□ -1.13
TDP1-204ENST00000545686 CLDN12P56749 244 aa8□□□□□ -1.13
TDP1-204ENST00000545686 MAT1AQ00266 395 aaKnown RBP8□□□□□ -1.13
TDP1-204ENST00000545686 LTBQ06643 244 aa8□□□□□ -1.13
TDP1-204ENST00000545686 BTN1A1Q13410 526 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ALKBH1Q13686 389 aaKnown RBP8□□□□□ -1.13
TDP1-204ENST00000545686 ZNHIT3Q15649 155 aaPredicted RBP8□□□□□ -1.13
TDP1-204ENST00000545686 FCRL6Q6DN72 434 aa8□□□□□ -1.13
TDP1-204ENST00000545686 NHLRC1Q6VVB1 395 aa8□□□□□ -1.13
TDP1-204ENST00000545686 KRT77Q7Z794 578 aa8□□□□□ -1.13
TDP1-204ENST00000545686 LRRTM1Q86UE6 522 aa8□□□□□ -1.13
TDP1-204ENST00000545686 CACUL1Q86Y37 369 aa8□□□□□ -1.13
TDP1-204ENST00000545686 PDZD9Q8IXQ8 264 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ZNF595Q8IYB9 648 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ZNF614Q8N883 585 aa8□□□□□ -1.13
TDP1-204ENST00000545686 OR2AK2Q8NG84 335 aa8□□□□□ -1.13
TDP1-204ENST00000545686 OR5M9Q8NGP3 310 aa8□□□□□ -1.13
TDP1-204ENST00000545686 OR5AK2Q8NH90 309 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ZNF417Q8TAU3 575 aa8□□□□□ -1.13
TDP1-204ENST00000545686 RERGQ96A58 199 aaPredicted RBP8□□□□□ -1.13
TDP1-204ENST00000545686 FAM131CQ96AQ9 280 aa8□□□□□ -1.13
TDP1-204ENST00000545686 PAWRQ96IZ0 340 aaKnown RBP8□□□□□ -1.13
TDP1-204ENST00000545686 MNTQ99583 582 aa8□□□□□ -1.13
TDP1-204ENST00000545686 GINS4Q9BRT9 223 aa8□□□□□ -1.13
TDP1-204ENST00000545686 SLC17A9Q9BYT1 436 aa8□□□□□ -1.13
TDP1-204ENST00000545686 CCDC86Q9H6F5 360 aaKnown RBP8□□□□□ -1.13
TDP1-204ENST00000545686 FGF22Q9HCT0 170 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ZDHHC4Q9NPG8 344 aa8□□□□□ -1.13
TDP1-204ENST00000545686 TMEM74BQ9NUR3 256 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ACTR10Q9NZ32 417 aa8□□□□□ -1.13
TDP1-204ENST00000545686 TBC1D29Q9UFV1 150 aa8□□□□□ -1.13
TDP1-204ENST00000545686 TRBV5-7A0A0A0MS05 114 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 NPIPB9F8W1W9 429 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 PLRG1O43660 514 aaKnown RBP7.99□□□□□ -1.13
TDP1-204ENST00000545686 DNAJB6O75190 326 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 ZNF254O75437 659 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 UPK3AO75631 287 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 KAT7O95251 611 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 ACRP10323 421 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 CCL5P13501 91 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 ADRA2CP18825 462 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 CSRP1P21291 193 aaKnown RBP7.99□□□□□ -1.13
TDP1-204ENST00000545686 ITGB8P26012 769 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 CD96P40200 585 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 H2BFSP57053 126 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 KIAA1024LP59773 190 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 CSRP2Q16527 193 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 PCGF3Q3KNV8 242 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 C2orf27AQ580R0 203 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 SFRP5Q5T4F7 317 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 FAAP20Q6NZ36 180 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 FIGLAQ6QHK4 219 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 ALKAL2Q6UX46 152 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 CDH26Q8IXH8 852 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 TMEM52Q8NDY8 209 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 C7orf57Q8NEG2 295 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 OR4C16Q8NGL9 310 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 OR6K3Q8NGY3 331 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 COQ8AQ8NI60 647 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 ZNRF4Q8WWF5 429 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 ORAI1Q96D31 301 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 ZFYVE21Q9BQ24 234 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 PELOQ9BRX2 385 aaKnown RBP7.99□□□□□ -1.13
TDP1-204ENST00000545686 ALG12Q9BV10 488 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 ARL6Q9H0F7 186 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 RNF208Q9H0X6 261 aa7.99□□□□□ -1.13
TDP1-204ENST00000545686 A0A1W2PQU0 124 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms