RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 VIPAS39Q9H9C1 493 aa18.4■□□□□ 0.54
SCARB1-210ENST00000545493 NPHS2Q9NP85 383 aa18.4■□□□□ 0.54
SCARB1-210ENST00000545493 ABCA1O95477 2261 aa18.4■□□□□ 0.54
SCARB1-210ENST00000545493 ARFGEF3Q5TH69 2177 aa18.4■□□□□ 0.54
SCARB1-210ENST00000545493 ZNF503-AS2A6NEH8 195 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 EDF1O60869 148 aaKnown RBP18.39■□□□□ 0.53
SCARB1-210ENST00000545493 SLC43A1O75387 559 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 CECR9P0C854 216 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 APOBEC3AP31941 199 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-210ENST00000545493 SH3BGRP55822 239 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-210ENST00000545493 NPTX1Q15818 432 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 HDXQ7Z353 690 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 WDFY1Q8IWB7 410 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 C11orf65Q8NCR3 313 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 BHLHE22Q8NFJ8 381 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-210ENST00000545493 GPR32P1Q8NGA4 272 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 ZNF837Q96EG3 531 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-210ENST00000545493 SLC47A1Q96FL8 570 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 OR2M2Q96R28 347 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 KATNB1Q9BVA0 655 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 GPR35Q9HC97 309 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 NDUFAF1Q9Y375 327 aa18.39■□□□□ 0.53
SCARB1-210ENST00000545493 LRRN3E7EW58 273 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 ANGPT2O15123 496 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 CD5LO43866 347 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 CRLF1O75462 422 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 SERPINB7O75635 380 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 SASH3O75995 380 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 IGKV3-15P01624 115 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 IGLV1-44P01699 117 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 HLA-DOBP13765 273 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 CALCRP30988 508 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 CDH12P55289 794 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 CYP51A1Q16850 503 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 SWI5Q1ZZU3 235 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 PHYHD1Q5SRE7 291 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 ANKRD16Q6P6B7 361 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 CLEC2AQ6UVW9 174 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 H1FNTQ75WM6 255 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-210ENST00000545493 NET1Q7Z628 596 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-210ENST00000545493 RANBP3LQ86VV4 465 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-210ENST00000545493 ANKK1Q8NFD2 765 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 OR6S1Q8NH40 331 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 MOGAT1Q96PD6 335 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 TMEM27Q9HBJ8 222 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 SLC13A4Q9UKG4 626 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 ALPK2Q86TB3 2170 aa18.38■□□□□ 0.53
SCARB1-210ENST00000545493 LOC102725191A0A1B0GVB3 256 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 MS4A18H0YCH9 400 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 AKAP8O43823 692 aaKnown RBP18.37■□□□□ 0.53
SCARB1-210ENST00000545493 SEC14L2O76054 403 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 LY6HO94772 140 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 CELA3BP08861 270 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 ARF1P84077 181 aaKnown RBP18.37■□□□□ 0.53
SCARB1-210ENST00000545493 IL1RL1Q01638 556 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 NAAAQ02083 359 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 POU3F1Q03052 451 aaPredicted RBP18.37■□□□□ 0.53
SCARB1-210ENST00000545493 RBBP4Q09028 425 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 C1DQ13901 141 aaKnown RBP18.37■□□□□ 0.53
SCARB1-210ENST00000545493 RAB35Q15286 201 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 MST1LQ2TV78 715 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 CEACAM16Q2WEN9 425 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 MS4A18Q3C1V0 323 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 SWT1Q5T5J6 900 aaKnown RBP18.37■□□□□ 0.53
SCARB1-210ENST00000545493 SCAIQ8N9R8 606 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 RNF217Q8TC41 542 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 FBXO17Q96EF6 278 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 EPYCQ99645 322 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 RHNO1Q9BSD3 238 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 CRLF2Q9HC73 371 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 SELENONQ9NZV5 590 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 CORINQ9Y5Q5 1042 aa18.37■□□□□ 0.53
SCARB1-210ENST00000545493 FBN1P35555 2871 aaKnown RBP18.36■□□□□ 0.53
SCARB1-210ENST00000545493 A0A0G2JND7 137 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 GPRIN2O60269 458 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 NQO1P15559 274 aaKnown RBP18.36■□□□□ 0.53
SCARB1-210ENST00000545493 NFYCQ13952 458 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 MFSD13AQ14CX5 517 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 DUSP7Q16829 419 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 C3orf36Q3SXR2 165 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 WDR88Q6ZMY6 472 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 TSPYL5Q86VY4 417 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-210ENST00000545493 UEVLDQ8IX04 471 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 GPR137CQ8N3F9 429 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 PIK3C3Q8NEB9 887 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 OR4D11Q8NGI4 311 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 OR6T1Q8NGN1 323 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 SIKE1Q9BRV8 207 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 TMEM43Q9BTV4 400 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 KAT8Q9H7Z6 458 aaKnown RBP18.36■□□□□ 0.53
SCARB1-210ENST00000545493 EVA1AQ9H8M9 152 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 CA10Q9NS85 328 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 MED29Q9NX70 200 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 TRIM33Q9UPN9 1127 aa18.36■□□□□ 0.53
SCARB1-210ENST00000545493 FMO6PO60774 539 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 LYPD3O95274 346 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 THY1P04216 161 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 TP53P04637 393 aaPredicted RBP18.35■□□□□ 0.53
SCARB1-210ENST00000545493 CD247P20963 164 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 EFNA4P52798 201 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms