RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 NAA11Q9BSU3 229 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-223ENST00000545440 TMEM38AQ9H6F2 299 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 ESRP2Q9H6T0 727 aaKnown RBP6.77□□□□□ -1.33
SNHG1-223ENST00000545440 MRGBPQ9NV56 204 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 PRSS50Q9UI38 385 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 LEF1Q9UJU2 399 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-223ENST00000545440 NOSIPQ9Y314 301 aaKnown RBP6.77□□□□□ -1.33
SNHG1-223ENST00000545440 RNF115Q9Y4L5 304 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 VPS13CQ709C8 3753 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 MAP1AP78559 2803 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-223ENST00000545440 LIPT2A6NK58 231 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 AQP7P3A6NL99 342 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 A8MVM7 634 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 EVPLLA8MZ36 301 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 HS3ST1O14792 307 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 ANGPT2O15123 496 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 FRS3O43559 492 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 RAMP1O60894 148 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 SMPD2O60906 423 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 FZD7O75084 574 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 NPIPB7O75200 414 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 MRPL33O75394 65 aaKnown RBP6.76□□□□□ -1.33
SNHG1-223ENST00000545440 LYZL6O75951 148 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 PRG2P13727 222 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 GGT1P19440 569 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 NCF2P19878 526 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-223ENST00000545440 CCNA2P20248 432 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 IGHV1-2P23083 117 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 CXCR1P25024 350 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 LIMS1P48059 325 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 CDK6Q00534 326 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 SLC17A1Q14916 467 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 TSC22D1Q15714 1073 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 TIMM23BQ5SRD1 257 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 NCMAPQ5T1S8 102 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 OTUD3Q5T2D3 398 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-223ENST00000545440 C1QTNF12Q5T7M4 302 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 METTL21CQ5VZV1 264 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 ADAM5Q6NVV9 412 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 DHRS4L2Q6PKH6 230 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 C5orf46Q6UWT4 87 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 DHDDSQ86SQ9 333 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 KRT73Q86Y46 540 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 C10orf111Q8N326 155 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 CLIP4Q8N3C7 705 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 DPP10Q8N608 796 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 STPG3Q8N7X2 389 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 C1orf162Q8NEQ5 155 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-223ENST00000545440 NFKBIDQ8NI38 313 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 IGFBPL1Q8WX77 278 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 TMEM45BQ96B21 275 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 C3orf49Q96BT1 292 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 DNAJA3Q96EY1 480 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 CPPED1Q9BRF8 314 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-223ENST00000545440 SPATA5L1Q9BVQ7 753 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 SF3B5Q9BWJ5 86 aaKnown RBP6.76□□□□□ -1.33
SNHG1-223ENST00000545440 IKZF5Q9H5V7 419 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 EVA1AQ9H8M9 152 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 C12orf10Q9HB07 376 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 ASB6Q9NWX5 421 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 TAS2R16Q9NYV7 291 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-223ENST00000545440 TESQ9UGI8 421 aaKnown RBP6.76□□□□□ -1.33
SNHG1-223ENST00000545440 ANGPT4Q9Y264 503 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 FLVCR1Q9Y5Y0 555 aa6.76□□□□□ -1.33
SNHG1-223ENST00000545440 A0A0G2JND7 137 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 PRORSD1PA6NEY8 169 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 OR5H1A6NKK0 313 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 PDLIM1O00151 329 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 ARHGEF9O43307 516 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 RAD51DO75771 328 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 VAMP5O95183 116 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 AHSA1O95433 338 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 IGHV3-9P01782 118 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 PAX1P15863 534 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 SLC6A2P23975 617 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 ADSLP30566 484 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-223ENST00000545440 NCALDP61601 193 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 NKX6-1P78426 367 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-223ENST00000545440 BSPH1Q075Z2 132 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 CEACAM7Q14002 265 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 SCARB2Q14108 478 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 CAPRIN1Q14444 709 aaKnown RBP6.75□□□□□ -1.33
SNHG1-223ENST00000545440 PPA1Q15181 289 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 OR7A5Q15622 319 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 STK11Q15831 433 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 ADRM1Q16186 407 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 Q5PR19 223 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 C1orf140Q5VVS0 124 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 FAM91A1Q658Y4 838 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 OR7E24Q6IFN5 339 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 PRSS57Q6UWY2 283 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 CASP12Q6UXS9 341 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 DLEU7Q6UYE1 221 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 P3H2Q8IVL5 708 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 UBE2J2Q8N2K1 259 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 C17orf78Q8N4C9 275 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF433Q8N7K0 673 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF611Q8N823 705 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 LSMEM1Q8N8F7 131 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms