RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PTGESO14684 152 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 PRKRAO75569 313 aaKnown RBP14.34□□□□□ -0.11
CHD4-210ENST00000544040 HIST1H1TP22492 207 aaPredicted RBP14.34□□□□□ -0.11
CHD4-210ENST00000544040 PRAMEF20Q5VT98 475 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 OR5M11Q96RB7 305 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 G3V3Y1 287 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 HOXA11P31270 313 aaPredicted RBP14.34□□□□□ -0.11
CHD4-210ENST00000544040 HBMQ6B0K9 141 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 FAM111BQ6SJ93 734 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 SCD5Q86SK9 330 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 ZNF566Q969W8 418 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 C8orf33Q9H7E9 229 aaPredicted RBP14.34□□□□□ -0.11
CHD4-210ENST00000544040 V9GYS6 101 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 TMEM212A6NML5 194 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 SLC43A1O75387 559 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 F10P00742 488 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 RPL11P62913 178 aaKnown RBP14.34□□□□□ -0.11
CHD4-210ENST00000544040 SIRPAP78324 504 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 KIR2DS3Q14952 304 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 OR8G2PQ6IF36 304 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 PGAP1Q75T13 922 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 ZNF480Q8WV37 535 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 GPR78Q96P69 363 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 LRP5LA4QPB2 252 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 ZNF623O75123 536 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 SCG5P05408 212 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 UBE2G2P60604 165 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 TSPAN31Q12999 210 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 STEAP1BQ6NZ63 245 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 FAM185AQ8N0U4 392 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 HSFX1Q9UBD0 423 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 ENTPD2Q9Y5L3 495 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 PRSS38A1L453 326 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 GABRA4P48169 554 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 GIPRP48546 466 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 TGFBR3Q03167 851 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 GLYR1Q49A26 553 aaPredicted RBP14.33□□□□□ -0.11
CHD4-210ENST00000544040 PARS2Q7L3T8 475 aaKnown RBP14.33□□□□□ -0.11
CHD4-210ENST00000544040 RAB39BQ96DA2 213 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 UBL7Q96S82 380 aaPredicted RBP14.33□□□□□ -0.11
CHD4-210ENST00000544040 C1orf198Q9H425 327 aa14.33□□□□□ -0.11
CHD4-210ENST00000544040 KIDINS220Q9ULH0 1771 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 PPP1R2P9O14990 202 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 PRAMEF4O60810 478 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 CEBPBP17676 345 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 FCER1GP30273 86 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 LTB4RQ15722 352 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 CDKN3Q16667 212 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 TMUB2Q71RG4 321 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 DPPA4Q7L190 304 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 PLPP7Q8NBV4 271 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 TMEM106AQ96A25 262 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 TCTN2Q96GX1 697 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 SLC6A17Q9H1V8 727 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 TMEM131LA2VDJ0 1609 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 GABARAPH6UMI1 98 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 GABARAPO95166 117 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 ELK1P19419 428 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 ERVFC1P60507 584 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 OR2T27Q8NH04 317 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 H1FXQ92522 213 aaKnown RBP14.33□□□□□ -0.12
CHD4-210ENST00000544040 GINS3Q9BRX5 216 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 PIGTQ969N2 578 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 DCLRE1CQ96SD1 692 aaKnown RBP14.33□□□□□ -0.12
CHD4-210ENST00000544040 NIT2Q9NQR4 276 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 NPAP1Q9NZP6 1156 aa14.33□□□□□ -0.12
CHD4-210ENST00000544040 PDGFAP04085 211 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 S100A11P31949 105 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 KIAA0141Q14154 515 aaPredicted RBP14.32□□□□□ -0.12
CHD4-210ENST00000544040 IAH1Q2TAA2 248 aaPredicted RBP14.32□□□□□ -0.12
CHD4-210ENST00000544040 TVP23CQ96ET8 276 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 RBFOX1Q9NWB1 397 aaKnown RBP14.32□□□□□ -0.12
CHD4-210ENST00000544040 SNX11Q9Y5W9 270 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 ZNF891A8MT65 544 aaPredicted RBP14.32□□□□□ -0.12
CHD4-210ENST00000544040 HLA-HP01893 362 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 OR8U8P0C7N1 319 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 PSMB3P49720 205 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 RAB11AP62491 216 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 TMEM182Q6ZP80 229 aaPredicted RBP14.32□□□□□ -0.12
CHD4-210ENST00000544040 S100A7AQ86SG5 101 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 TMEM255BQ8WV15 326 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 C20orf27Q9GZN8 174 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CT45A6P0DMU7 189 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CT45A5P0DMU8 189 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CT45A7P0DMV0 189 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CT45A8P0DMV1 189 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CT45A9P0DMV2 189 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 SLC35A2P78381 396 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 OR8B8Q15620 311 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CT45A2Q5DJT8 189 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CT45A1Q5HYN5 189 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 OR52I1Q8NGK6 324 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 OR2T11Q8NH01 316 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CT45A3Q8NHU0 189 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 FGGYQ96C11 551 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 TREX1Q9NSU2 369 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 PSORS1C1Q9UIG5 152 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 NENFQ9UMX5 172 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 ADAM10O14672 748 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms