RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 IL20RAQ9UHF4 553 aa10.39□□□□□ -0.75
CDH4-201ENST00000543233 IGLON5A6NGN9 336 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 PRICKLE3O43900 615 aaPredicted RBP10.38□□□□□ -0.75
CDH4-201ENST00000543233 OR10H3O60404 316 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 CA3P07451 260 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 THBS1P07996 1170 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 IL3P08700 152 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 QDPRP09417 244 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 GLP1RP43220 463 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 RPS10P46783 165 aaKnown RBP10.38□□□□□ -0.75
CDH4-201ENST00000543233 RGNQ15493 299 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 C2orf68Q2NKX9 166 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 GLDNQ6ZMI3 551 aaPredicted RBP10.38□□□□□ -0.75
CDH4-201ENST00000543233 OLIG3Q7RTU3 272 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 OR1J4Q8NGS1 313 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 CCDC107Q8WV48 283 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 ROBO4Q8WZ75 1007 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 SUSD6Q92537 303 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 OSTF1Q92882 214 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 DOHHQ9BU89 302 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 FAM120CQ9NX05 1096 aaKnown RBP10.38□□□□□ -0.75
CDH4-201ENST00000543233 SF3B6Q9Y3B4 125 aaKnown RBP10.38□□□□□ -0.75
CDH4-201ENST00000543233 H7BY64 318 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 SYT5O00445 386 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 IFNA17P01571 189 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 SLC35G4P0C7Q5 338 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 ALPPL2P10696 532 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 MAT2AP31153 395 aaKnown RBP10.38□□□□□ -0.75
CDH4-201ENST00000543233 MTAPQ13126 283 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 IFI44LQ53G44 452 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 NKAPLQ5M9Q1 402 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 TMEM240Q5SV17 173 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 C9orf64Q5T6V5 341 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 CEACAM20Q6UY09 585 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 LRRTM4Q86VH4 590 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 C7orf61Q8IZ16 206 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 OR9A1PQ8NGU1 263 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 PRAP1Q96NZ9 151 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 CCNL2Q96S94 520 aaPredicted RBP10.38□□□□□ -0.75
CDH4-201ENST00000543233 CHST5Q9GZS9 411 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 SLITRK2Q9H156 845 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 SPACA1Q9HBV2 294 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 FTSJ1Q9UET6 329 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 A6NNC1 897 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 B4E171 279 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 H0YIV9 168 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 SC5DO75845 299 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 IFNGP01579 166 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 RFX3P48380 749 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 CSNK1EP49674 416 aaKnown RBP10.38□□□□□ -0.75
CDH4-201ENST00000543233 PRSS53Q2L4Q9 553 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 FAM27D1Q5T7N8 215 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 HBMQ6B0K9 141 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 SERPINA11Q86U17 422 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 Q8NFD4 153 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 CXorf40AQ8TE69 158 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 RAB8BQ92930 207 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 FAIM2Q9BWQ8 316 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 WDR13Q9H1Z4 485 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 CTPS2Q9NRF8 586 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 PARPBPQ9NWS1 579 aa10.38□□□□□ -0.75
CDH4-201ENST00000543233 GLOD5A6NK44 160 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 E9PQ18 207 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 DLEU1O43261 78 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 DIRAS3O95661 229 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 SEMG1P04279 462 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 ARG1P05089 322 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 GPX2P18283 190 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 FGF9P31371 208 aaPredicted RBP10.37□□□□□ -0.75
CDH4-201ENST00000543233 PXNP49023 591 aaPredicted RBP10.37□□□□□ -0.75
CDH4-201ENST00000543233 CRYBA2P53672 197 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 SEC13P55735 322 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 ZNF763Q0D2J5 394 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 HSPB3Q12988 150 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 HNRNPA1L2Q32P51 320 aaKnown RBP10.37□□□□□ -0.75
CDH4-201ENST00000543233 RPS26P11Q5JNZ5 115 aaPredicted RBP10.37□□□□□ -0.75
CDH4-201ENST00000543233 C1orf53Q5VUE5 145 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 ACSM5Q6NUN0 579 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 LPCAT3Q6P1A2 487 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 MSANTD1Q6ZTZ1 278 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 THNSL2Q86YJ6 484 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 OR8J2Q8NGG1 315 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 OR51Q1Q8NH59 317 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 ZCCHC10Q8TBK6 192 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 TFGQ92734 400 aaPredicted RBP10.37□□□□□ -0.75
CDH4-201ENST00000543233 FGF13Q92913 245 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 TRAPPC13A5PLN9 417 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 ACOD1A6NK06 481 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 NME6O75414 186 aaPredicted RBP10.37□□□□□ -0.75
CDH4-201ENST00000543233 F10P00742 488 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 SFTA3P0C7M3 94 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 HOXB9P17482 250 aaPredicted RBP10.37□□□□□ -0.75
CDH4-201ENST00000543233 PNLIPRP1P54315 467 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 PITPNAQ00169 270 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 TPBGQ13641 420 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 RNF151Q2KHN1 245 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 SLC35D3Q5M8T2 416 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 HACD4Q5VWC8 232 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 DEGS2Q6QHC5 323 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms