RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 MRPS28Q9Y2Q9 187 aaKnown RBP3.55□□□□□ -1.84
MDM2-229ENST00000543046 NPTNQ9Y639 398 aa3.55□□□□□ -1.84
MDM2-229ENST00000543046 V9GYH0 126 aa3.55□□□□□ -1.84
MDM2-229ENST00000543046 TOPAZ1Q8N9V7 1692 aa3.55□□□□□ -1.84
MDM2-229ENST00000543046 BAZ2AQ9UIF9 1905 aaKnown RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 MAST2Q6P0Q8 1798 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 RBBP6Q7Z6E9 1792 aaKnown RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 ARFGEF2Q9Y6D5 1785 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 PTPRJQ12913 1337 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 A0A087WV48 116 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 A0A0U1RQS6 177 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 URADA6NGE7 173 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ASB14A6NK59 587 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 INMT-MINDY4F8WBC2 141 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 TEX46H3BTG2 121 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 APOC4-APOC2K7ER74 178 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 SGK494L7N484 410 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CACNB4O00305 520 aaPredicted RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 PDCD5O14737 125 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 MEIS2O14770 477 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 UBDO15205 165 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CHP2O43745 196 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 POP7O75817 140 aaKnown RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 GOSR1O95249 250 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 MPC2O95563 127 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 IFNB1P01574 187 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 APOC2P02655 101 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 MT-ND2P03891 347 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 GP1BAP07359 652 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CSF3P09919 207 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ZNF806P0C7X5 589 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 FAM157CP0CG43 387 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ANXA3P12429 323 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ANXA8P13928 327 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CBR1P16152 277 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ARF4P18085 180 aaPredicted RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 TSPAN8P19075 237 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 OGNP20774 298 aaKnown RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 GADD45AP24522 165 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CRABP1P29762 137 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 PDHA2P29803 388 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CTNNB1P35222 781 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 PMELP40967 661 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CD86P42081 329 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 MAP2K4P45985 399 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CSRP3P50461 194 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 RAB28P51157 221 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 VAMP7P51809 220 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ATXN3P54252 364 aaPredicted RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 NAPAP54920 295 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 HNRNPKP61978 463 aaKnown RBP eCLIP3.54□□□□□ -1.84
MDM2-229ENST00000543046 MAT1AQ00266 395 aaKnown RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 CHRNB3Q05901 458 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 SLC3A1Q07837 685 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 RAPSNQ13702 412 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 IL11RAQ14626 422 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 SMCO1Q147U7 214 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 SF3A2Q15428 464 aaKnown RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 FCN2Q15485 313 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 TAF1AQ15573 450 aaPredicted RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 ZNF79Q15937 498 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 PHLDA2Q53GA4 152 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 AGKQ53H12 422 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 KLHL26Q53HC5 615 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 OR2B11Q5JQS5 317 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 C10orf91Q5T1B1 145 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 AVPI1Q5T686 147 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ANXA8L1Q5VT79 327 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 SAXO2Q658L1 398 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CAPN13Q6MZZ7 669 aaPredicted RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 RPL13AP3Q6NVV1 102 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ERICH5Q6P6B1 374 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 AFTPHQ6ULP2 937 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 PAMR1Q6UXH9 720 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 NPSR1Q6W5P4 371 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 C3P1Q6ZMU1 363 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 FAM92BQ6ZTR7 304 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 TPGS1Q6ZTW0 290 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 MSANTD1Q6ZTZ1 278 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ZNF720Q7Z2F6 126 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ADGRD2Q7Z7M1 963 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 SLC47A2Q86VL8 602 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ZFAND4Q86XD8 727 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 SLC22A9Q8IVM8 553 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CDKL3Q8IVW4 592 aaPredicted RBP3.54□□□□□ -1.84
MDM2-229ENST00000543046 THEM5Q8N1Q8 247 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 NPEPL1Q8NDH3 523 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 TRPV1Q8NER1 839 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 IPMKQ8NFU5 416 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 OR6J1Q8NGC5 347 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 OR13C3Q8NGS6 347 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ACTL9Q8TC94 416 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 ST7LQ8TDW4 575 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CCDC107Q8WV48 283 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 TCTEX1D2Q8WW35 142 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 SLC5A11Q8WWX8 675 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 SELENOMQ8WWX9 145 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 FAF2Q96CS3 445 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 LRRC58Q96CX6 371 aa3.54□□□□□ -1.84
MDM2-229ENST00000543046 CCDC126Q96EE4 140 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms