RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 BPIFB2Q8N4F0 458 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ELP5Q8TE02 316 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 RBPMSQ93062 196 aaKnown RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 CHMP1AQ9HD42 196 aaPredicted RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 WBP1LQ9NX94 342 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 MRPS17Q9Y2R5 130 aaKnown RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ETV7Q9Y603 341 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SCN3AQ9NY46 2000 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 IFITM5A6NNB3 132 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ZNF705EA8MWA4 302 aaPredicted RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ZNF593O00488 134 aaPredicted RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SYT7O43581 403 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 CEACAM5P06731 702 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 PPP3CBP16298 524 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 MAOBP27338 520 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 CEBPGP53567 150 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 CLRN1P58418 232 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 RAB2AP61019 212 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 MAT1AQ00266 395 aaKnown RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 GALK2Q01415 458 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SPOCK1Q08629 439 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 CLVS2Q5SYC1 327 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 TMEM244Q5VVB8 128 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 TMEM185AQ8NFB2 350 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 PHOSPHO2Q8TCD6 241 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ASB12Q8WXK4 309 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 FAM3CQ92520 227 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ZC3H10Q96K80 434 aaKnown RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 BMFQ96LC9 184 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 TEX101Q9BY14 249 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 OR10A5Q9H207 317 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 PTGES2Q9H7Z7 377 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SLC6A20Q9NP91 592 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SLC22A7Q9Y694 548 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 UTRNP46939 3433 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 TMEM82A0PJX8 343 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ANKRD61A6NGH8 418 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 GPR171O14626 319 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 CTNSO60931 367 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SCGB1D2O95969 90 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 LIPCP11150 499 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 IFNGR1P15260 489 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ANXA7P20073 488 aaKnown RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 TACR3P29371 465 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 YPEL5P62699 121 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 RUNX2Q13950 521 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 GLYR1Q49A26 553 aaPredicted RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SLC25A30Q5SVS4 291 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 CFAP77Q6ZQR2 320 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 IDO2Q6ZQW0 420 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 MORN4Q8NDC4 146 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 ASB17Q8WXJ9 295 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 UPRTQ96BW1 309 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 PRRT1Q99946 306 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 WDR76Q9H967 626 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 KCNIP3Q9Y2W7 256 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 TMEM269A0A1B0GVZ9 245 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 CPED1A4D0V7 1026 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 CDC14CA4D256 554 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 AIPO00170 330 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 PLPP2O43688 288 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SIX6O95475 246 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 HLA-AP01891 365 aaKnown RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 AMY2BP19961 511 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 MMP15P51511 669 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 TLE3Q04726 772 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 TMEM31Q5JXX7 168 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 VASNQ6EMK4 673 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 STEAP1BQ6NZ63 245 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 BOLLQ8N9W6 283 aaKnown RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 DERL3Q96Q80 235 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 NRTNQ99748 197 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SLC6A17Q9H1V8 727 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 WSB2Q9NYS7 404 aaPredicted RBP7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 SLC23A1Q9UHI7 598 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 FLVCR2Q9UPI3 526 aa7.55□□□□□ -1.2
PRKAB1-207ENST00000542698 A0A087WV62 115 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 CISD3P0C7P0 127 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 PVALBP20472 110 aaPredicted RBP7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 FBLP22087 321 aaKnown RBP7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 SLC2A5P22732 501 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 ARHGDIBP52566 201 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 MEF2DQ14814 521 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 MEP1BQ16820 701 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 AWAT2Q6E213 333 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 HEPHL1Q6MZM0 1159 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 TEX261Q6UWH6 196 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 TMPRSS11FQ6ZWK6 438 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 MED25Q71SY5 747 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 TRMT61AQ96FX7 289 aaKnown RBP7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 NECAB3Q96P71 396 aaPredicted RBP7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 ABHD1Q96SE0 405 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 HRASLSQ9HDD0 168 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 PCDHB16Q9NRJ7 776 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 U3KQ87 197 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 SCN10AQ9Y5Y9 1956 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 TRAV1-2A0A0B4J238 106 aa7.54□□□□□ -1.2
PRKAB1-207ENST00000542698 H0Y8X5 98 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms