RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 GASTP01350 101 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 IFNA10P01566 189 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 ALDOBP05062 364 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 CYC1P08574 325 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 ZNF25P17030 456 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 SLC6A1P30531 599 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 FRKP42685 505 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 BTG1P62324 171 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 MLLT11Q13015 90 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 FZD5Q13467 585 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 GAS6Q14393 721 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 SLC35D3Q5M8T2 416 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 IL20RBQ6UXL0 311 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 WDR53Q7Z5U6 358 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TCEANCQ8N8B7 351 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 FAM46DQ8NEK8 389 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 THAP3Q8WTV1 239 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 OTULINQ96BN8 352 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 PPCDCQ96CD2 204 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 ZNF764Q96H86 408 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 BOD1Q96IK1 185 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 THAP7Q9BT49 309 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TMED9Q9BVK6 235 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 ZNF282Q9UDV7 671 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 KIF25Q9UIL4 384 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 ADAM29Q9UKF5 820 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 PRUNE2Q8WUY3 3088 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 LRIT2A6NDA9 550 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 E9PI62 339 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 E9PQ18 207 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SOX1O00570 391 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 GPRIN2O60269 458 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 CYTIPO60759 359 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 CTNSO60931 367 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 RPP14O95059 124 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SIX6O95475 246 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 HLA-DQB1P01920 261 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 GIFP27352 417 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 AKT2P31751 481 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 RORAP35398 523 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SERPINF1P36955 418 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 RPL3P39023 403 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 CRISP1P54107 249 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 INSL4Q14641 139 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 PLA1AQ53H76 456 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SFRP5Q5T4F7 317 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 IDNKQ5T6J7 187 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 ZNF793Q6ZN11 406 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 TMEM91Q6ZNR0 172 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SELENOHQ8IZQ5 122 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SPAG16Q8N0X2 631 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 OR13H1Q8NG92 308 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 TMEM163Q8TC26 289 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 GPBAR1Q8TDU6 330 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 C2CD4CQ8TF44 421 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 GLYATL2Q8WU03 294 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 ELMOD3Q96FG2 381 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SENP5Q96HI0 755 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 DDOQ99489 341 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 DPH7Q9BTV6 452 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 MFFQ9GZY8 342 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 CHRDQ9H2X0 955 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 DLL4Q9NR61 685 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 DHCR7Q9UBM7 475 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 MOKQ9UQ07 419 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 PLEKHA6Q9Y2H5 1048 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SLCO1B1Q9Y6L6 691 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 C2orf92A0A1B0GVN3 265 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 DLEU1O43261 78 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 MPZL2O60487 215 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SDC3O75056 442 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SPP1P10451 314 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 DRD5P21918 477 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 PPIBP23284 216 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 MC3RP41968 323 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 PTGFRP43088 359 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 CCR6P51684 374 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SNRPEP62304 92 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 FABP5Q01469 135 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 RIPPLY1Q0D2K3 151 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 TCEA2Q15560 299 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 USF2Q15853 346 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 MICBQ29980 383 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 TRIM61Q5EBN2 209 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 ZNF468Q5VIY5 522 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 KIAA0895LQ68EN5 471 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 FBXO42Q6P3S6 717 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 CASP12Q6UXS9 341 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 Q6ZSR6 202 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 SYT13Q7L8C5 426 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 TSEN54Q7Z6J9 526 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 OR52N2Q8NGI0 321 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 WBP1Q96G27 269 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 PEX11GQ96HA9 241 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 TVP23BQ9NYZ1 205 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 AHSPQ9NZD4 102 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 PHF11Q9UIL8 331 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 COLEC10Q9Y6Z7 277 aa7.34□□□□□ -1.23
PDLIM5-221ENST00000542407 PLSCR5A0PG75 271 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 URADA6NGE7 173 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms