RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 INAQ16352 499 aa24.96■■□□□ 1.59
CCM2-218ENST00000541586 PRR30Q53SZ7 412 aaPredicted RBP24.96■■□□□ 1.59
CCM2-218ENST00000541586 C3orf33Q6P1S2 294 aa24.96■■□□□ 1.59
CCM2-218ENST00000541586 CXXC5Q7LFL8 322 aaKnown RBP24.96■■□□□ 1.59
CCM2-218ENST00000541586 GTPBP8Q8N3Z3 284 aaPredicted RBP24.96■■□□□ 1.59
CCM2-218ENST00000541586 STX19Q8N4C7 294 aa24.96■■□□□ 1.59
CCM2-218ENST00000541586 BBS1Q8NFJ9 593 aa24.96■■□□□ 1.59
CCM2-218ENST00000541586 SNRNP40Q96DI7 357 aaKnown RBP24.96■■□□□ 1.59
CCM2-218ENST00000541586 POTEKPQ9BYX7 375 aa24.96■■□□□ 1.59
CCM2-218ENST00000541586 DKKL1Q9UK85 242 aa24.96■■□□□ 1.59
CCM2-218ENST00000541586 RPH3AQ9Y2J0 694 aaPredicted RBP24.96■■□□□ 1.59
CCM2-218ENST00000541586 ZFYVE26Q68DK2 2539 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 RIIAD1A6NNX1 92 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 ARPC3O15145 178 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 ZIC3O60481 467 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 PRB1P04280 392 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 TFPIP10646 304 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 JUNBP17275 347 aaPredicted RBP24.95■■□□□ 1.59
CCM2-218ENST00000541586 ERVK-25P63136 954 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 PMS2P3Q13401 168 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 FOXB2Q5VYV0 432 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 NXNL2Q5VZ03 156 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 PLBD1Q6P4A8 553 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 OR5J2Q8NH18 312 aa24.95■■□□□ 1.59
CCM2-218ENST00000541586 SPIN1Q9Y657 262 aaPredicted RBP24.95■■□□□ 1.59
CCM2-218ENST00000541586 SNTNA6NMZ2 147 aa24.95■■□□□ 1.58
CCM2-218ENST00000541586 CRYABP02511 175 aaKnown RBP24.95■■□□□ 1.58
CCM2-218ENST00000541586 MAP2K4P45985 399 aa24.95■■□□□ 1.58
CCM2-218ENST00000541586 GTF2A1P52655 376 aaPredicted RBP24.95■■□□□ 1.58
CCM2-218ENST00000541586 SGCBQ16585 318 aa24.95■■□□□ 1.58
CCM2-218ENST00000541586 TMEM44Q2T9K0 475 aa24.95■■□□□ 1.58
CCM2-218ENST00000541586 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.95■■□□□ 1.58
CCM2-218ENST00000541586 MFSD8Q8NHS3 518 aa24.95■■□□□ 1.58
CCM2-218ENST00000541586 OTULINQ96BN8 352 aa24.95■■□□□ 1.58
CCM2-218ENST00000541586 ZNF703Q9H7S9 590 aaPredicted RBP24.95■■□□□ 1.58
CCM2-218ENST00000541586 TAS2R5Q9NYW4 299 aa24.95■■□□□ 1.58
CCM2-218ENST00000541586 NPIPA5E9PKD4 350 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 WISP2O76076 250 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 FADS2O95864 444 aaKnown RBP24.94■■□□□ 1.58
CCM2-218ENST00000541586 IFNGP01579 166 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 F13BP05160 661 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 CD14P08571 375 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 CELA3AP09093 270 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 HIST1H1CP16403 213 aaKnown RBP24.94■■□□□ 1.58
CCM2-218ENST00000541586 ZNF3P17036 446 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 CTXN1P60606 82 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 SELENBP1Q13228 472 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 CRMP1Q14194 572 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 SLC10A1Q14973 349 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 RFKQ969G6 155 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 ASPNQ9BXN1 380 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 TMEM185BQ9H7F4 350 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 MED20Q9H944 212 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.94■■□□□ 1.58
CCM2-218ENST00000541586 NPIPA1Q9UND3 350 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 SLC6A5Q9Y345 797 aa24.94■■□□□ 1.58
CCM2-218ENST00000541586 M0R082 166 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 IDH3BO43837 385 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 IMPDH2P12268 514 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 IDUAP35475 653 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 CDH11P55287 796 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 ITGADQ13349 1161 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 HYAL4Q2M3T9 481 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 YRDCQ86U90 279 aaKnown RBP24.93■■□□□ 1.58
CCM2-218ENST00000541586 FAM109AQ8N4B1 249 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 SVOPQ8N4V2 548 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 OR52E2Q8NGJ4 325 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 OR4K13Q8NH42 304 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 ZNF417Q8TAU3 575 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 ZNF587Q96SQ5 575 aaPredicted RBP24.93■■□□□ 1.58
CCM2-218ENST00000541586 HCAR1Q9BXC0 346 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 NDEL1Q9GZM8 345 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 ASF1BQ9NVP2 202 aa24.93■■□□□ 1.58
CCM2-218ENST00000541586 PRR23D1E9PI22 279 aaPredicted RBP24.92■■□□□ 1.58
CCM2-218ENST00000541586 ADRA2AP08913 450 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 PRR23D2P0DMB1 279 aaPredicted RBP24.92■■□□□ 1.58
CCM2-218ENST00000541586 RAB39AQ14964 217 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 MFSD13AQ14CX5 517 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 OR7A5Q15622 319 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 RAET1LQ5VY80 246 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 FAM122BQ7Z309 247 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 CYB561A3Q8NBI2 242 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 SLC25A43Q8WUT9 341 aaPredicted RBP24.92■■□□□ 1.58
CCM2-218ENST00000541586 FAR1Q8WVX9 515 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 PTP4A1Q93096 173 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 FAM192AQ9GZU8 254 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 MRPL39Q9NYK5 338 aaKnown RBP24.92■■□□□ 1.58
CCM2-218ENST00000541586 H2AFY2Q9P0M6 372 aaPredicted RBP24.92■■□□□ 1.58
CCM2-218ENST00000541586 KLHL21Q9UJP4 597 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 SMIM31A0A1B0GVY4 71 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 OPN1LWP04000 364 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 APEHP13798 732 aaKnown RBP24.92■■□□□ 1.58
CCM2-218ENST00000541586 SRD5A2P31213 254 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 MTNR1AP48039 350 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 MYBPHQ13203 477 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 GID4Q8IVV7 300 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 SLC37A3Q8NCC5 494 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 FAM83FQ8NEG4 500 aaPredicted RBP24.92■■□□□ 1.58
CCM2-218ENST00000541586 SDR9C7Q8NEX9 313 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 OR14L1PQ8NHC6 308 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms