RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 IRAK3Q9Y616 596 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 TRBV9A0A0B4J1U6 114 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 A0A1W2PRD5 423 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 BCLAF3A2AJT9 711 aaKnown RBP4.85□□□□□ -1.63
DDB1-219ENST00000541513 EFCAB10A6NFE3 127 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 LINC00473A8K010 186 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 ARHGEF33A8MVX0 844 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 PRSS44E7EML9 344 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 PROB1E7EW31 1015 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 P2RX6O15547 441 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 MLNRO43193 412 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 GPX5O75715 221 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 CRYZL1O95825 349 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 ALDOBP05062 364 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 FABP1P07148 127 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 SMIM10L1P0DMW3 83 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 EGR2P11161 476 aaPredicted RBP4.85□□□□□ -1.63
DDB1-219ENST00000541513 ANXA3P12429 323 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 IMPDH1P20839 514 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 BGNP21810 368 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 UGT1A4P22310 534 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 IFNA8P32881 189 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 GCLMP48507 274 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 CSNK1DP48730 415 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 GLUD2P49448 558 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 OR2B6P58173 313 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 KCNJ2P63252 427 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 ZXDAP98168 799 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 IFFO1Q0D2I5 559 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 TRAF2Q12933 501 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 TAF10Q12962 218 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 CYTH1Q15438 398 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 CHI3L2Q15782 390 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 DUSP6Q16828 381 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 PTPN20Q4JDL3 420 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 C5orf47Q569G3 176 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 YIF1BQ5BJH7 314 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 MANEAQ5SRI9 462 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 C3orf33Q6P1S2 294 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 Q7L0L9 218 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 PAGE2Q7Z2X7 111 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 TMEM139Q8IV31 216 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 GPALPP1Q8IXQ4 340 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 SYS1Q8N2H4 156 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 TMEM86AQ8N2M4 240 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 GBGT1Q8N5D6 347 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 NATD1Q8N6N6 113 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 NECAP1Q8NC96 275 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 DMBX1Q8NFW5 382 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 SMARCD2Q92925 531 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 SMIM10Q96HG1 83 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 ERGIC2Q96RQ1 377 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 NAPGQ99747 312 aaPredicted RBP4.85□□□□□ -1.63
DDB1-219ENST00000541513 NAT9Q9BTE0 207 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 LRRC1Q9BTT6 524 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 MAP1LC3CQ9BXW4 147 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 SLC25A51Q9H1U9 297 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 INPP5EQ9NRR6 644 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.85□□□□□ -1.63
DDB1-219ENST00000541513 FGF21Q9NSA1 209 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 SAMSN1Q9NSI8 373 aaKnown RBP4.85□□□□□ -1.63
DDB1-219ENST00000541513 IMP3Q9NV31 184 aaKnown RBP4.85□□□□□ -1.63
DDB1-219ENST00000541513 KLRF1Q9NZS2 232 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 MYEF2Q9P2K5 600 aaKnown RBP4.85□□□□□ -1.63
DDB1-219ENST00000541513 GHRLQ9UBU3 117 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 CYB5R1Q9UHQ9 305 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 MRM2Q9UI43 246 aaKnown RBP4.85□□□□□ -1.63
DDB1-219ENST00000541513 FBXL4Q9UKA2 621 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 PILRBQ9UKJ0 227 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 SLC6A5Q9Y345 797 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 TCAF1Q9Y4C2 921 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 WIPI2Q9Y4P8 454 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 FKBP7Q9Y680 259 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 PATJQ8NI35 1801 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 C2orf16Q68DN1 1984 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 DOCK8Q8NF50 2099 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 COL6A3P12111 3177 aa4.85□□□□□ -1.63
DDB1-219ENST00000541513 EYSQ5T1H1 3165 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 NOTCH4Q99466 2003 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 ANAPC1Q9H1A4 1944 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 A0A1W2PQ67 120 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 FABP12A6NFH5 140 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 UNC119BA6NIH7 251 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 H3BMH7 237 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 KLRC4-KLRK1H3BQV0 150 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 RFXANKO14593 260 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 TOX3O15405 576 aaPredicted RBP4.84□□□□□ -1.63
DDB1-219ENST00000541513 B4GAT1O43505 415 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 AIREO43918 545 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 HUS1O60921 280 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 PRKRAO75569 313 aaKnown RBP4.84□□□□□ -1.63
DDB1-219ENST00000541513 OAZ2O95190 189 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 MYL2P10916 166 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 CHRNB2P17787 502 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 SSTR4P31391 388 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 CDKN2CP42773 168 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 BRCC3P46736 316 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 RGRP47804 291 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 RFX3P48380 749 aa4.84□□□□□ -1.63
DDB1-219ENST00000541513 STK19P49842 368 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms