RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TIMP2P16035 220 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 TAGLN2P37802 199 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 REEP5Q00765 189 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 SOWAHCQ53LP3 525 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 PHF19Q5T6S3 580 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 TMEM164Q5U3C3 297 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 BCDIN3DQ7Z5W3 292 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 OR52E1Q8NGJ3 308 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 TNFRSF13CQ96RJ3 184 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 CMSS1Q9BQ75 279 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 SLC25A19Q9HC21 320 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 PURGQ9UJV8 347 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 TK1P04183 234 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 ATP1B3P54709 279 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 NSDHLQ15738 373 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 CPNE4Q96A23 557 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 SGK3Q96BR1 496 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 SGCZQ96LD1 299 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 PLEKHM1Q9Y4G2 1056 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 C17orf105B2RV13 164 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 MGMTP16455 207 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 TACR3P29371 465 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 DCAF7P61962 342 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 UPRTQ96BW1 309 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 RTP3Q9BQQ7 232 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 CHRDQ9H2X0 955 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 HNRNPKP61978 463 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 HBG1P69891 147 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 HBG2P69892 147 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 BAMBIQ13145 260 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 PRSS42Q7Z5A4 293 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 RSPRY1Q96DX4 576 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 P2RY12Q9H244 342 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 TAF9BQ9HBM6 251 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 HSFX1Q9UBD0 423 aa13.87□□□□□ -0.19
SMARCA4-207ENST00000541122 TRIM77I1YAP6 450 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 AKR7A2O43488 359 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 LAP3P28838 519 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 HOXA9P31269 272 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 TSFMP43897 325 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 IAH1Q2TAA2 248 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 KCNRGQ8N5I3 272 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 OR5K2Q8NHB8 316 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 PDXPQ96GD0 296 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 TSSK2Q96PF2 358 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 ZNF385DQ9H6B1 395 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 RNF212BA8MTL3 300 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 KLF8O95600 359 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 MT-ND4LP03901 98 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 NFYBP25208 207 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 C17orf107Q6ZR85 190 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 OR51S1Q8NGJ8 323 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 AMDHD1Q96NU7 426 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 SLC25A37Q9NYZ2 338 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 LOC102725191A0A1B0GVB3 256 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 C20orf202A1L168 122 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 ZNF44P15621 663 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 DGCR2P98153 550 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 UQCC3Q6UW78 93 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 TMEM184AQ6ZMB5 413 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 OR52I2Q8NH67 350 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 TM4SF18Q96CE8 201 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 NCDNQ9UBB6 729 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 IGLV3-10A0A075B6K4 115 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 ZNF593O00488 134 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 GLCEO94923 617 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 CHRM2P08172 466 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 ZNF865P0CJ78 1059 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 SERPINA2P20848 420 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 TMEM64Q6YI46 380 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 RDH10Q8IZV5 341 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 NANOS1Q8WY41 292 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 RNF170Q96K19 258 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 WDFY2Q96P53 400 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 CHST8Q9H2A9 424 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 EPHX3Q9H6B9 360 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 PLSCR3Q9NRY6 295 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 CYB5R1Q9UHQ9 305 aa13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 GPR55Q9Y2T6 319 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-207ENST00000541122 C17orf112F2Z3M2 114 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 F5H5K5 113 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 SPNP16150 400 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 MSR1P21757 451 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 SQSTM1Q13501 440 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 NFATC4Q14934 902 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 GLYR1Q49A26 553 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 ADAM5Q6NVV9 412 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 ZNF561Q8N587 486 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 OR1J2Q8NGS2 313 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 C22orf15Q8WYQ4 148 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 LPAR4Q99677 370 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 TGIF2Q9GZN2 237 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 FGF20Q9NP95 211 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 A6NLC8 198 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 NUDT21O43809 227 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 ADAMTS4O75173 837 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 JTBO76095 146 aa13.85□□□□□ -0.19
SMARCA4-207ENST00000541122 SBK2P0C263 348 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms