RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 TUSC5Q8IXB3 177 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 SVOPLQ8N434 492 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 RPRMLQ8N4K4 120 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 PFN4Q8NHR9 129 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 FNDC8Q8TC99 324 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 GIPC3Q8TF64 312 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 CENPNQ96H22 339 aaPredicted RBP15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 MOGAT1Q96PD6 335 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 DENND2DQ9H6A0 471 aaPredicted RBP15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 ELOVL5Q9NYP7 299 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 KLF2Q9Y5W3 355 aaPredicted RBP15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 MPDZO75970 2070 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 MYO7BQ6PIF6 2116 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 IGHV3-15A0A0B4J1V0 119 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 BLOC1S5-TXNDC5H3BN57 136 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 TNFSF13O75888 250 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 BMP5P22003 454 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 OMPP47874 163 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 ASCL1P50553 236 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 DAP3P51398 398 aaKnown RBP15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 P2RY4P51582 365 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 LTBQ06643 244 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 TSPAN31Q12999 210 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 FBXL19-AS1Q494R0 122 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 CREB3L2Q70SY1 520 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 KIF18BQ86Y91 864 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 CCDC103Q8IW40 242 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 ZNF100Q8IYN0 542 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 GCNT2Q8N0V5 402 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 POMGNT2Q8NAT1 580 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 OR4C15Q8NGM1 316 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 SLCO4A1Q96BD0 722 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 APH1AQ96BI3 265 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 DGCR6LQ9BY27 220 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 C20orf141Q9NUB4 165 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 FLVCR1Q9Y5Y0 555 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 DOCK7Q96N67 2140 aa15.58■□□□□ 0.08
CLSTN3-210ENST00000540931 HIVEP3Q5T1R4 2406 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 CENPEQ02224 2701 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 KIAA1549Q9HCM3 1950 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 ZNF726A6NNF4 738 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 RRP9O43818 475 aaKnown RBP15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 ZG16O60844 167 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 ADAP00813 363 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 RPS4XP62701 263 aaKnown RBP15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 FOXD4Q12950 439 aaPredicted RBP15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 ALG10Q5BKT4 473 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 SHQ1Q6PI26 577 aaKnown RBP15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 TBPL2Q6SJ96 375 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 CD300LDQ6UXZ3 194 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 AAED1Q7RTV5 226 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 ZDHHC13Q8IUH4 622 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 OR5K1Q8NHB7 308 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 ITLN2Q8WWU7 325 aaPredicted RBP15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 STARD4Q96DR4 205 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 LRR1Q96L50 414 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 HDHD5Q9BXW7 423 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 INIPQ9NRY2 104 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 CACNA1DQ01668 2161 aa15.57■□□□□ 0.08
CLSTN3-210ENST00000540931 ERICH4A6NGS2 130 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 UNC119BA6NIH7 251 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 MS4A18H0YCH9 400 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 ENTPD5O75356 428 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 TIPRLO75663 272 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 NDUFB2O95178 105 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 BCL10O95999 233 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 PAX7P23759 505 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 UQCRC1P31930 480 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 OR3A2P47893 321 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 P2RY6Q15077 328 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 MS4A18Q3C1V0 323 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 CCDC71Q8IV32 467 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 CLDN22Q8N7P3 220 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 NAXEQ8NCW5 288 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 OR10G2Q8NGC3 310 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 FAM46AQ96IP4 442 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 TEX12Q9BXU0 123 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 OR10A4Q9H209 315 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 B3GAT2Q9NPZ5 323 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 TAS2R5Q9NYW4 299 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 JKAMPQ9P055 326 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 U3KQV3 271 aa15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 NCOA6Q14686 2063 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-210ENST00000540931 MED12LQ86YW9 2145 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 A6NIZ1 184 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 A8MXE2 369 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 IDH3BO43837 385 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 AHCYL1O43865 530 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 PIP5K1CO60331 668 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 SLC43A1O75387 559 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 SMNDC1O75940 238 aaKnown RBP eCLIP15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 APEHP13798 732 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 MAKP20794 623 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 CBLP22681 906 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 GSSP48637 474 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 RAP1BP61224 184 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 RAP1AP62834 184 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 POU3F1Q03052 451 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 TGFBR3Q03167 851 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 RPL18Q07020 188 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms