RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ALKBH3Q96Q83 286 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 FNDC11Q9BVV2 318 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 FKRPQ9H9S5 495 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 MEPEQ9NQ76 525 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 DCAF13Q9NV06 445 aaKnown RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 CD300AQ9UGN4 299 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 ITGB1BP2Q9UKP3 347 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 A4GNTQ9UNA3 340 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 MED31Q9Y3C7 131 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 V9GYQ6 96 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 ANKHD1Q8IWZ3 2542 aaKnown RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 DCHS2Q6V1P9 2916 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 A0A1W2PR80 420 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 ZNF587BE7ETH6 402 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 BLOC1S5-TXNDC5H3BN57 136 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 PDLIM1O00151 329 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 FFAR1O14842 300 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 KLF4O43474 513 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 RNF13O43567 381 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 TRAF3IP2O43734 574 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-215ENST00000540904 SLC43A1O75387 559 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 UPK3AO75631 287 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 MT-ND1P03886 318 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 ADORA3P0DMS8 318 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 FUT4P22083 530 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 CALB2P22676 271 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 MPGP29372 298 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 NR1H2P55055 460 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 TGFBR3Q03167 851 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 PPA1Q15181 289 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 BEX5Q5H9J7 111 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 TIMM23BQ5SRD1 257 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 CARD17Q5XLA6 110 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 OR7E24Q6IFN5 339 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 RINLQ6ZS11 566 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 SLC46A3Q7Z3Q1 461 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 ABHD12BQ7Z5M8 362 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-215ENST00000540904 PXKQ7Z7A4 578 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 P2RY8Q86VZ1 359 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 FAM86B1Q8N7N1 296 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 SGTBQ96EQ0 304 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 TXNDC15Q96J42 360 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 HS6ST2Q96MM7 605 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 OR2M2Q96R28 347 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 EMC6Q9BV81 110 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 PLEKHF2Q9H8W4 249 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 GORASP2Q9H8Y8 452 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 NGBQ9NPG2 151 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 C20orf141Q9NUB4 165 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 MED29Q9NX70 200 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 MAGEL2Q9UJ55 1249 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 ZNF229Q9UJW7 825 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 SAMD4AQ9UPU9 718 aaKnown RBP8.12□□□□□ -1.11
SNHG1-215ENST00000540904 RCE1Q9Y256 329 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 PLEKHA6Q9Y2H5 1048 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 FAM32AQ9Y421 112 aaKnown RBP8.12□□□□□ -1.11
SNHG1-215ENST00000540904 NOX1Q9Y5S8 564 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 ITPR2Q14571 2701 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 ABCA12Q86UK0 2595 aa8.12□□□□□ -1.11
SNHG1-215ENST00000540904 APCP25054 2843 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 SLC35F4A4IF30 521 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 OR6C65A6NJZ3 312 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 ZNF726A6NNF4 738 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 hCG_2039718K7EN88 272 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 ARPC2O15144 300 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 AKAP8O43823 692 aaKnown RBP8.11□□□□□ -1.11
SNHG1-215ENST00000540904 PIP5K1CO60331 668 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 OR7A10O76100 309 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 ZNF432O94892 652 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 ASAH2BP0C7U1 165 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 T-ENOLP0DO92 83 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 IFNGR1P15260 489 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 FUT1P19526 365 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 LOXP28300 417 aaPredicted RBP8.11□□□□□ -1.11
SNHG1-215ENST00000540904 ROR2Q01974 943 aaKnown RBP8.11□□□□□ -1.11
SNHG1-215ENST00000540904 TRAM2Q15035 370 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 GABRA6Q16445 453 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 FXNQ16595 210 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 SPATS1Q496A3 300 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 HMBOX1Q6NT76 420 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 LINGO2Q7L985 606 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 TRPM8Q7Z2W7 1104 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 NANOGNBQ7Z5D8 188 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 TSEN54Q7Z6J9 526 aaKnown RBP8.11□□□□□ -1.11
SNHG1-215ENST00000540904 CYP4Z1Q86W10 505 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 OFCC1Q8IZS5 231 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 TMEM123Q8N131 208 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 GPR137CQ8N3F9 429 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 PIK3C3Q8NEB9 887 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 PYURFQ96I23 114 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 NSMCE2Q96MF7 247 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 MUS81Q96NY9 551 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 ESRP2Q9H6T0 727 aaKnown RBP8.11□□□□□ -1.11
SNHG1-215ENST00000540904 UBTD1Q9HAC8 227 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 NMNAT1Q9HAN9 279 aaPredicted RBP8.11□□□□□ -1.11
SNHG1-215ENST00000540904 MAN2C1Q9NTJ4 1040 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 CCM2LQ9NUG4 571 aaPredicted RBP8.11□□□□□ -1.11
SNHG1-215ENST00000540904 TAS2R5Q9NYW4 299 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 NDUFAF4Q9P032 175 aa8.11□□□□□ -1.11
SNHG1-215ENST00000540904 ST6GALNAC2Q9UJ37 374 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms