RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SSTR1P30872 391 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 KRT6CP48668 564 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 CLK1P49759 484 aaKnown RBP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 PRKAG1P54619 331 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 SRSF4Q08170 494 aaKnown RBP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF763Q0D2J5 394 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 SLC17A1Q14916 467 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 SLC9A3R2Q15599 337 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 DUSP5Q16690 384 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 BEAN1Q3B7T3 259 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 MMEL1Q495T6 779 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 TIGD2Q4W5G0 525 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 SPDYAQ5MJ70 313 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 VAX1Q5SQQ9 334 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 KPRPQ5T749 579 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ASPHD2Q6ICH7 369 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 C16orf87Q6PH81 154 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 CTAGE3PQ8IX95 158 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ZBED8Q8IZ13 594 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 MIER2Q8N344 545 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 COX18Q8N8Q8 333 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 SLC16A11Q8NCK7 471 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 IL17RDQ8NFM7 739 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 OR1K1Q8NGR3 316 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 OR4F5Q8NH21 305 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ACTRT1Q8TDG2 376 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF483Q8TF39 744 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 PYROXD1Q8WU10 500 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 TMEM234Q8WY98 164 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ST8SIA2Q92186 375 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 BCL2L2Q92843 193 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 YIPF5Q969M3 257 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 TMEM45BQ96B21 275 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 PHF21BQ96EK2 531 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 GIMAP5Q96F15 307 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 APIPQ96GX9 242 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 GPR78Q96P69 363 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 MS4A4EQ96PG1 132 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ACPTQ9BZG2 426 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF385DQ9H6B1 395 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 MSL2Q9HCI7 577 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 DUSP22Q9NRW4 184 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ACER3Q9NUN7 267 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 GIN1Q9NXP7 522 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 GRHL1Q9NZI5 618 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ZIM2Q9NZV7 527 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF69Q9UC07 566 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ZDHHC2Q9UIJ5 367 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 KLHL21Q9UJP4 597 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 MID2Q9UJV3 735 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF180Q9UJW8 692 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 HDGFL3Q9Y3E1 203 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 FLVCR1Q9Y5Y0 555 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 LYSTQ99698 3801 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 IGHV2OR16-5A0A0B4J2B6 119 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 CLPSL1A2RUU4 121 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 OR6C65A6NJZ3 312 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 NPIPB9F8W1W9 429 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 PPP6CO00743 305 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ANKRD28O15084 1053 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 TP73O15350 636 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF264O43296 627 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 AKAP8O43823 692 aaKnown RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 SMIM24O75264 130 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 URI1O94763 535 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 NDUFA7O95182 113 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 NGFP01138 241 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 IGHV2-5P01817 119 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 RPS17P08708 135 aaKnown RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 GSTA2P09210 222 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 RBP1P09455 135 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 RAP2AP10114 183 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 TFPIP10646 304 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 UBL4AP11441 157 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 TCN1P20061 433 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 NR4A1P22736 598 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 PCGF2P35227 344 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ARR3P36575 388 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 APOBEC1P41238 236 aaKnown RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ASMTP46597 345 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 MTNR1AP48039 350 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ATP4BP51164 291 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ATP12AP54707 1039 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 RAG2P55895 527 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 OR2B6P58173 313 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 RAP2BP61225 183 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 POU6F2P78424 691 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 H3F3AP84243 136 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 MERTKQ12866 999 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 HSPB3Q12988 150 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 SNTB2Q13425 540 aaKnown RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 NAB1Q13506 487 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 DAG1Q14118 895 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 HLXQ14774 488 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 RASA2Q15283 850 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 TAF9Q16594 264 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 NDUFAF6Q330K2 333 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ARMCX4Q5H9R4 360 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms