RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 MAGEB4O15481 346 aaPredicted RBP12.5□□□□□ -0.41
RTN3-210ENST00000540798 APEX1P27695 318 aaKnown RBP12.5□□□□□ -0.41
RTN3-210ENST00000540798 GDI2P50395 445 aaKnown RBP12.5□□□□□ -0.41
RTN3-210ENST00000540798 PYDC2Q56P42 97 aa12.5□□□□□ -0.41
RTN3-210ENST00000540798 SFXN4Q6P4A7 337 aa12.5□□□□□ -0.41
RTN3-210ENST00000540798 TRILQ7L0X0 811 aa12.5□□□□□ -0.41
RTN3-210ENST00000540798 C10orf53Q8N6V4 93 aa12.5□□□□□ -0.41
RTN3-210ENST00000540798 GPR119Q8TDV5 335 aa12.5□□□□□ -0.41
RTN3-210ENST00000540798 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
RTN3-210ENST00000540798 NEDD4LQ96PU5 975 aa12.5□□□□□ -0.41
RTN3-210ENST00000540798 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
RTN3-210ENST00000540798 ADAM30Q9UKF2 790 aa12.5□□□□□ -0.41
RTN3-210ENST00000540798 VSTM2BA6NLU5 285 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 PRR32B1ATL7 298 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 PLA2G10O15496 165 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 UCHL1P09936 223 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 MYL9P24844 172 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 RPS5P46782 204 aaKnown RBP12.49□□□□□ -0.41
RTN3-210ENST00000540798 DLX5P56178 289 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 NKAIN1Q4KMZ8 207 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 GPR139Q6DWJ6 353 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 LYPD4Q6UWN0 246 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 SLC16A9Q7RTY1 509 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 TIGD4Q8IY51 512 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 LILRB4Q8NHJ6 448 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 OR6C1Q96RD1 312 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.49□□□□□ -0.413e-6■□□□□ 8.9
RTN3-210ENST00000540798 RPRD1BQ9NQG5 326 aaKnown RBP12.49□□□□□ -0.41
RTN3-210ENST00000540798 ACOXLQ9NUZ1 547 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 TAS2R5Q9NYW4 299 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 SUSD2Q9UGT4 822 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 PI4KAP42356 2102 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 MT-ATP6P00846 226 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 ELK1P19419 428 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 CXCR1P25024 350 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 POLR2HP52434 150 aaKnown RBP12.49□□□□□ -0.41
RTN3-210ENST00000540798 FOXL2P58012 376 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 P2RY14Q15391 338 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 HLA-BQ31612 363 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 MISPQ8IVT2 679 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 UBQLNLQ8IYU4 475 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 OR13C5Q8NGS8 318 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 NUBPLQ8TB37 319 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 SNX33Q8WV41 574 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 THAP4Q8WY91 577 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 CCDC86Q9H6F5 360 aaKnown RBP12.49□□□□□ -0.41
RTN3-210ENST00000540798 B3GAT2Q9NPZ5 323 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 CYSLTR2Q9NS75 346 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 NPFFR2Q9Y5X5 522 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 CABIN1Q9Y6J0 2220 aa12.49□□□□□ -0.41
RTN3-210ENST00000540798 ANKRD61A6NGH8 418 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 GATBO75879 557 aaKnown RBP12.48□□□□□ -0.41
RTN3-210ENST00000540798 SLC34A2O95436 690 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 F13BP05160 661 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 GP1BBP13224 206 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 CASP3P42574 277 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 PWWP2BQ6NUJ5 590 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 SHISA6Q6ZSJ9 500 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 LRRC28Q86X40 367 aaPredicted RBP12.48□□□□□ -0.41
RTN3-210ENST00000540798 GHDCQ8N2G8 530 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 OR6K6Q8NGW6 343 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 DEPDC7Q96QD5 511 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 KCNJ15Q99712 375 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 WDR77Q9BQA1 342 aaPredicted RBP12.48□□□□□ -0.41
RTN3-210ENST00000540798 TTTY10Q9BZA0 68 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 SLC22A4Q9H015 551 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 C11orf54Q9H0W9 315 aaPredicted RBP12.48□□□□□ -0.41
RTN3-210ENST00000540798 TP63Q9H3D4 680 aaPredicted RBP12.48□□□□□ -0.41
RTN3-210ENST00000540798 PRDM6Q9NQX0 595 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 GRHPRQ9UBQ7 328 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 IGHV3-20A0A0C4DH32 117 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 CPED1A4D0V7 1026 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 IDSB3KWA1 339 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 OR10A3P58181 314 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 EFR3AQ14156 821 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 QPRTQ15274 297 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 CEP78Q5JTW2 689 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 IDNKQ5T6J7 187 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 AGAP6Q5VW22 663 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 OVCH1Q7RTY7 1134 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 CDC20BQ86Y33 519 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 ADGRG3Q86Y34 549 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 RDH10Q8IZV5 341 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 PHYHIPQ92561 330 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 AGAP4Q96P64 663 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 SNX18Q96RF0 628 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 RXFP3Q9NSD7 469 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 GNG8Q9UK08 70 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 A0A1W2PRG6 482 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 TMEM72A0PK05 275 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 TMEM200CA6NKL6 621 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 DCTN6O00399 190 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 GPRIN2O60269 458 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 ALOX12BO75342 701 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 SCRG1O75711 98 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 CRYZL1O95825 349 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 SLC26A5P58743 744 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 EEF1A1P5Q5VTE0 462 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 C1QL3Q5VWW1 255 aa12.48□□□□□ -0.41
RTN3-210ENST00000540798 GRINAQ7Z429 371 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms