RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 THOC1Q96FV9 657 aaKnown RBP6.29□□□□□ -1.4
YBX3-209ENST00000540747 APOPT1Q96IL0 206 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 CCDC115Q96NT0 180 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 ANKRD27Q96NW4 1050 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 LRRC37BQ96QE4 947 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 KCNS3Q9BQ31 491 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 PTDSS2Q9BVG9 487 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 METTL17Q9H7H0 456 aaPredicted RBP6.29□□□□□ -1.4
YBX3-209ENST00000540747 NOX3Q9HBY0 568 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 G6PC2Q9NQR9 355 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 B3GNT2Q9NY97 397 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 NOP53Q9NZM5 478 aaKnown RBP6.29□□□□□ -1.4
YBX3-209ENST00000540747 SLC17A7Q9P2U7 560 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 B3GAT1Q9P2W7 334 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 RCE1Q9Y256 329 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 CHST2Q9Y4C5 530 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 WNK2Q9Y3S1 2297 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 A0A096LPE4 126 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 A0A1W2PPZ6 126 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 A8MVM7 634 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 SYNGR3O43761 229 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 SKAP2O75563 359 aaPredicted RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 AVPP01185 164 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 FSHBP01225 129 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 TFP02787 698 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 MSMBP08118 114 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 ADRA2AP08913 450 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 NR4A1P22736 598 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 ARR3P36575 388 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 MVDP53602 400 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 MRPS11P82912 194 aaKnown RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 TXNL4AP83876 142 aaKnown RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 ARF1P84077 181 aaKnown RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 IL1RL1Q01638 556 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 ROR2Q01974 943 aaKnown RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 EGR4Q05215 589 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 BNIP2Q12982 314 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 MAD2L1Q13257 205 aaPredicted RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 FXNQ16595 210 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 SLC9B1Q4ZJI4 515 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 C1orf140Q5VVS0 124 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 ATG16L1Q676U5 607 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 CGB2Q6NT52 195 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 NHLRC1Q6VVB1 395 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 ZNF627Q7L945 461 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 GPAT4Q86UL3 456 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 MDP1Q86V88 176 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 ANKRD46Q86W74 232 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 RNF130Q86XS8 419 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 ZNF440Q8IYI8 595 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 TMEM123Q8N131 208 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 TCP10LQ8TDR4 215 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 MRPL24Q96A35 216 aaKnown RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 TUBGCP3Q96CW5 907 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 MRPL37Q9BZE1 423 aaKnown RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 MYLK2Q9H1R3 596 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 AKTIPQ9H8T0 292 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 MTHFD2LQ9H903 347 aaPredicted RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 GPR35Q9HC97 309 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 SAR1AQ9NR31 198 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 RLIMQ9NVW2 624 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 HIF1ANQ9NWT6 349 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 MARCOQ9UEW3 520 aaPredicted RBP6.28□□□□□ -1.4
YBX3-209ENST00000540747 BTNL2Q9UIR0 455 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 RASD1Q9Y272 281 aa6.28□□□□□ -1.4
YBX3-209ENST00000540747 LOC102725191A0A1B0GVB3 256 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 TRAF3IP2O43734 574 aaPredicted RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 NCR1O76036 304 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 HPXP02790 462 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 DBIP07108 87 aaKnown RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 ERCC1P07992 297 aaPredicted RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 TFPTP0C1Z6 253 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 GKN3PP0CG01 181 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 GAAP10253 952 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 SAGP10523 405 aaPredicted RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 PNMTP11086 282 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ZNF35P13682 527 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 PRG2P13727 222 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ZNF14P17017 642 aaPredicted RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 ACHEP22303 614 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 CXCR1P25024 350 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 COL8A2P25067 703 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ETV4P43268 484 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ACTG1P63261 375 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 SNTB2Q13425 540 aaKnown RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 DAG1Q14118 895 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 DPY19L1Q2PZI1 675 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 GPAT3Q53EU6 434 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 AWAT1Q58HT5 328 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 SPANXN4Q5MJ08 99 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 COX20Q5RI15 118 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ANXA8L1Q5VT79 327 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 RNF220Q5VTB9 566 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 PRAMEF8Q5VWM4 474 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 PRAMEF7Q5VXH5 474 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 WBP2NLQ6ICG8 309 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 NIPAL3Q6P499 406 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ZNF836Q6ZNA1 936 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 PEG10Q86TG7 708 aaKnown RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 CCDC36Q8IYA8 594 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms