RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 MYPOPQ86VE0 399 aaPredicted RBP12.26□□□□□ -0.45
SNHG1-213ENST00000540725 GPR137CQ8N3F9 429 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 NUP37Q8NFH4 326 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 ZNF417Q8TAU3 575 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 SLC38A4Q969I6 547 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 TAAR8Q969N4 342 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 ZNF587Q96SQ5 575 aaPredicted RBP12.26□□□□□ -0.45
SNHG1-213ENST00000540725 RSPO3Q9BXY4 272 aaPredicted RBP12.26□□□□□ -0.45
SNHG1-213ENST00000540725 C12orf10Q9HB07 376 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 GPR35Q9HC97 309 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 A0A1B0GWA3 101 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 ETS2P15036 469 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 CBR1P16152 277 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 SRD5A1P18405 259 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 HTR2AP28223 471 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 GRPRP30550 384 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 PRKAR1BP31321 381 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 IDH3GP51553 393 aaPredicted RBP12.25□□□□□ -0.45
SNHG1-213ENST00000540725 MAGOHP61326 146 aaKnown RBP12.25□□□□□ -0.45
SNHG1-213ENST00000540725 CEACAM16Q2WEN9 425 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 KRTAP24-1Q3LI83 254 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 IQCCQ4KMZ1 466 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 GOLGA6L1Q8N7Z2 621 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 ZNF837Q96EG3 531 aaPredicted RBP12.25□□□□□ -0.45
SNHG1-213ENST00000540725 BPESC1Q9GZL8 116 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 RAB1BQ9H0U4 201 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 ZNF442Q9H7R0 627 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 CRLF2Q9HC73 371 aa12.25□□□□□ -0.45
SNHG1-213ENST00000540725 IGKV1D-42A0A075B6H8 117 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 TRAV36DV7A0A075B6V5 113 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 IGHV2OR16-5A0A0B4J2B6 119 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 ZNF503-AS2A6NEH8 195 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 hCG_2039718K7EN88 272 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 TRAF3IP2O43734 574 aaPredicted RBP12.24□□□□□ -0.45
SNHG1-213ENST00000540725 AKAP8O43823 692 aaKnown RBP12.24□□□□□ -0.45
SNHG1-213ENST00000540725 ARAFP10398 606 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 ZNF23P17027 643 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 NPR2P20594 1047 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 CBLP22681 906 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 THBS2P35442 1172 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 THBS4P35443 961 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 STX1BP61266 288 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 IL1RL1Q01638 556 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 NPRL3Q12980 569 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 ALG10BQ5I7T1 473 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 FAM120AOSQ5T036 256 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 EPGNQ6UW88 154 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 H1FNTQ75WM6 255 aaPredicted RBP12.24□□□□□ -0.45
SNHG1-213ENST00000540725 COMTD1Q86VU5 262 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 TMEM123Q8N131 208 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 LSMEM1Q8N8F7 131 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 ZNF540Q8NDQ6 660 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 PIK3C3Q8NEB9 887 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 NFKBIDQ8NI38 313 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 DNAJA4Q8WW22 397 aaPredicted RBP12.24□□□□□ -0.45
SNHG1-213ENST00000540725 OR2M2Q96R28 347 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 SLC25A37Q9NYZ2 338 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 KLHL14Q9P2G3 628 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 FBXO9Q9UK97 447 aaPredicted RBP12.24□□□□□ -0.45
SNHG1-213ENST00000540725 USH1CQ9Y6N9 552 aa12.24□□□□□ -0.45
SNHG1-213ENST00000540725 LOC102725191A0A1B0GVB3 256 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 VSTM5A8MXK1 200 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 SEC14L2O76054 403 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 HNF1AP20823 631 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 ARR3P36575 388 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 CAPZA2P47755 286 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 MRPL19P49406 292 aaKnown RBP12.23□□□□□ -0.45
SNHG1-213ENST00000540725 LRIF1Q5T3J3 769 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 GCNT6Q5T4J0 391 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 REEP3Q6NUK4 255 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 DHRS4L2Q6PKH6 230 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 SPATA21Q7Z572 469 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 NET1Q7Z628 596 aaPredicted RBP12.23□□□□□ -0.45
SNHG1-213ENST00000540725 MDP1Q86V88 176 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 KRT73Q86Y46 540 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 MSRB3Q8IXL7 192 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 CCDC36Q8IYA8 594 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 C10orf111Q8N326 155 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 SVOPLQ8N434 492 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 TLCD1Q96CP7 247 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 ANKRD27Q96NW4 1050 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 DOK1Q99704 481 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 SPATA5L1Q9BVQ7 753 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 USP22Q9UPT9 525 aa12.23□□□□□ -0.45
SNHG1-213ENST00000540725 ZNF99A8MXY4 864 aaPredicted RBP12.22□□□□□ -0.45
SNHG1-213ENST00000540725 M0R3G1 203 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 POLR3GO15318 223 aaPredicted RBP12.22□□□□□ -0.45
SNHG1-213ENST00000540725 TPST1O60507 370 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 STAMBPO95630 424 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 HPRP00739 348 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 TGFAP01135 160 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 ERCC1P07992 297 aaPredicted RBP12.22□□□□□ -0.45
SNHG1-213ENST00000540725 DAOP14920 347 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 NQO1P15559 274 aaKnown RBP12.22□□□□□ -0.45
SNHG1-213ENST00000540725 GIFP27352 417 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 NCALDP61601 193 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 CDK6Q00534 326 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 SNTB2Q13425 540 aaKnown RBP12.22□□□□□ -0.45
SNHG1-213ENST00000540725 MFSD13AQ14CX5 517 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms