RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 RIBC2Q9H4K1 309 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 MRPL47Q9HD33 250 aaKnown RBP1.83□□□□□ -2.12
MDM2-227ENST00000540709 THUMPD1Q9NXG2 353 aaKnown RBP1.83□□□□□ -2.12
MDM2-227ENST00000540709 CLCF1Q9UBD9 225 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 RNF14Q9UBS8 474 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 LAMP5Q9UJQ1 280 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 N6AMT1Q9Y5N5 214 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 A0A1B0GWJ7 208 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 PRSS37A4D1T9 235 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 OXSR1O95747 527 aaPredicted RBP1.82□□□□□ -2.12
MDM2-227ENST00000540709 ALDOBP05062 364 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 CISD3P0C7P0 127 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 ZDHHC11BP0C7U3 371 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 UBTFL1P0CB47 393 aaPredicted RBP1.82□□□□□ -2.12
MDM2-227ENST00000540709 NPR2P20594 1047 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 DDOSTP39656 456 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 PPT1P50897 306 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 RPS14P62263 151 aaKnown RBP1.82□□□□□ -2.12
MDM2-227ENST00000540709 SLC15A2Q16348 729 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 RSPO1Q2MKA7 263 aaPredicted RBP1.82□□□□□ -2.12
MDM2-227ENST00000540709 ZNF546Q86UE3 836 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 ZNF683Q8IZ20 524 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 MYOCDQ8IZQ8 938 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 CATSPER1Q8NEC5 780 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 TRMT10AQ8TBZ6 339 aaKnown RBP1.82□□□□□ -2.12
MDM2-227ENST00000540709 OSTF1Q92882 214 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 PELI1Q96FA3 418 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 BMFQ96LC9 184 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 TGM7Q96PF1 710 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 RNF2Q99496 336 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 ZNF430Q9H8G1 570 aaPredicted RBP1.82□□□□□ -2.12
MDM2-227ENST00000540709 ZFP14Q9HCL3 533 aa1.82□□□□□ -2.12
MDM2-227ENST00000540709 TCRBV9S1A1TA0A576 114 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 MBLAC1A4D2B0 266 aaPredicted RBP1.81□□□□□ -2.12
MDM2-227ENST00000540709 RGSL1A5PLK6 1076 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 RBMY1BA6NDE4 496 aaKnown RBP1.81□□□□□ -2.12
MDM2-227ENST00000540709 RBMY1EA6NEQ0 496 aaKnown RBP1.81□□□□□ -2.12
MDM2-227ENST00000540709 C12orf77C9JDV5 145 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 MED7O43513 233 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 CD5LO43866 347 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 TBX19O60806 448 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 ATP5LO75964 103 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 OPN1MWP04001 364 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 KRT8P05787 483 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 DCNP07585 359 aaKnown RBP1.81□□□□□ -2.12
MDM2-227ENST00000540709 RBMY1DP0C7P1 496 aaKnown RBP1.81□□□□□ -2.12
MDM2-227ENST00000540709 RBMY1A1P0DJD3 496 aaKnown RBP1.81□□□□□ -2.12
MDM2-227ENST00000540709 OPN1MW2P0DN77 364 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 OPN1MW3P0DN78 364 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 KRT13P13646 458 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 GNA11P29992 359 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 GDI1P31150 447 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 CA8P35219 290 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 RGS4P49798 205 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 CBX1P83916 185 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 NCBP1Q09161 790 aaKnown RBP1.81□□□□□ -2.12
MDM2-227ENST00000540709 VGLL4Q14135 290 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 GNMTQ14749 295 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 STK11Q15831 433 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 PDK4Q16654 411 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 C10orf120Q5SQS8 335 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 OR2G6Q5TZ20 316 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 PYHIN1Q6K0P9 492 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 UTS2BQ765I0 119 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 LRP11Q86VZ4 500 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 CALHM3Q86XJ0 350 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 ACOT4Q8N9L9 421 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 CD300LFQ8TDQ1 290 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 UFD1Q92890 307 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 UBE2E3Q969T4 207 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 CXorf40BQ96DE9 158 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 RNF167Q9H6Y7 350 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 SIRT7Q9NRC8 400 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 CTPS2Q9NRF8 586 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 EXD2Q9NVH0 621 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 GIN1Q9NXP7 522 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 BFARQ9NZS9 450 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 MRPS33Q9Y291 106 aaKnown RBP1.81□□□□□ -2.12
MDM2-227ENST00000540709 FRMPD3Q5JV73 1810 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 PNPLA6Q8IY17 1366 aa1.81□□□□□ -2.12
MDM2-227ENST00000540709 KIR2DS1A0A191URI9 304 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 B3GALNT1O75752 331 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 CSF3P09919 207 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 GKN3PP0CG01 181 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 SMIM10L1P0DMW3 83 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 MUC1P15941 1255 aaPredicted RBP1.8□□□□□ -2.12
MDM2-227ENST00000540709 DRD5P21918 477 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 PCMT1P22061 227 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 OMGP23515 440 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 HMGB2P26583 209 aaKnown RBP1.8□□□□□ -2.12
MDM2-227ENST00000540709 BTCP35070 178 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 SSR1P43307 286 aaKnown RBP1.8□□□□□ -2.12
MDM2-227ENST00000540709 REG3AQ06141 175 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 KIR2DS1Q14954 304 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 SGCAQ16586 387 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 ZBED5Q49AG3 693 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 C1orf220Q5T0J3 134 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 Q6ZR03 302 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 PEX26Q7Z412 305 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 KRTAP13-1Q8IUC0 172 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms