RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 STX18Q9P2W9 335 aaKnown RBP9.11□□□□□ -0.95
CDCA3-208ENST00000540683 NSD1Q96L73 2696 aaPredicted RBP9.11□□□□□ -0.95
CDCA3-208ENST00000540683 HEATR1Q9H583 2144 aaKnown RBP9.1□□□□□ -0.95
CDCA3-208ENST00000540683 A0A0B4J2E0 115 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 A0A1B0GX12 115 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 SMAD7O15105 426 aaKnown RBP9.1□□□□□ -0.95
CDCA3-208ENST00000540683 CHP2O43745 196 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 LGI1O95970 557 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 NR2C1P13056 603 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 PRG2P13727 222 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 SLC25A16P16260 332 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 CDH2P19022 906 aaPredicted RBP9.1□□□□□ -0.95
CDCA3-208ENST00000540683 CD247P20963 164 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 PCGF2P35227 344 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 CLDN17P56750 224 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 DMTNQ08495 405 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 PUDPQ08623 228 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 PMS2P3Q13401 168 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 OR1Q1Q15612 314 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 NPTX1Q15818 432 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 TBRG1Q3YBR2 411 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 TTC33Q6PID6 262 aaPredicted RBP9.1□□□□□ -0.95
CDCA3-208ENST00000540683 DLEU7Q6UYE1 221 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.1□□□□□ -0.95
CDCA3-208ENST00000540683 ARPINQ7Z6K5 226 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 PXKQ7Z7A4 578 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 ZIC4Q8N9L1 334 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF540Q8NDQ6 660 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 OR8J3Q8NGG0 315 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 LILRB1Q8NHL6 650 aaPredicted RBP9.1□□□□□ -0.95
CDCA3-208ENST00000540683 LZICQ8WZA0 190 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 DNAJA3Q96EY1 480 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 KAT8Q9H7Z6 458 aaKnown RBP9.1□□□□□ -0.95
CDCA3-208ENST00000540683 SLC52A3Q9NQ40 469 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 KLHL14Q9P2G3 628 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 USP22Q9UPT9 525 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 ABCA2Q9BZC7 2435 aa9.1□□□□□ -0.95
CDCA3-208ENST00000540683 TRAPPC13A5PLN9 417 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 GMNCA6NCL1 334 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 TRIM64A6NGJ6 449 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 TRIM64BA6NI03 449 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF99A8MXY4 864 aaPredicted RBP9.09□□□□□ -0.95
CDCA3-208ENST00000540683 M0R082 166 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 NDUFS8O00217 210 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 RAMP1O60894 148 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 MFN2O95140 757 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 LY6G6DO95868 133 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 C1QCP02747 245 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 GRPRP30550 384 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 CDKN1AP38936 164 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 SELENOPP49908 381 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 MMP16P51512 607 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 ARFIP2P53365 341 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 PCBP3P57721 371 aaKnown RBP9.09□□□□□ -0.95
CDCA3-208ENST00000540683 RPS23P62266 143 aaKnown RBP9.09□□□□□ -0.95
CDCA3-208ENST00000540683 ROR2Q01974 943 aaKnown RBP9.09□□□□□ -0.95
CDCA3-208ENST00000540683 EGR4Q05215 589 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 C9orf135Q5VTT2 229 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 UGT2A3Q6UWM9 527 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 EPHX4Q8IUS5 362 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 MSRB3Q8IXL7 192 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 WDR31Q8NA23 367 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 OR6N1Q8NGY5 312 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF417Q8TAU3 575 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 TAAR8Q969N4 342 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 KTI12Q96EK9 354 aaPredicted RBP9.09□□□□□ -0.95
CDCA3-208ENST00000540683 SLC41A3Q96GZ6 507 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 ALKBH3Q96Q83 286 aaPredicted RBP9.09□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF587Q96SQ5 575 aaPredicted RBP9.09□□□□□ -0.95
CDCA3-208ENST00000540683 MCHR1Q99705 422 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 PTDSS2Q9BVG9 487 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 CACNG6Q9BXT2 260 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 REG4Q9BYZ8 158 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 GSX1Q9H4S2 264 aaPredicted RBP9.09□□□□□ -0.95
CDCA3-208ENST00000540683 MED4Q9NPJ6 270 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 NANSQ9NR45 359 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 NPAP1Q9NZP6 1156 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 SLAMF8Q9P0V8 285 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 CRNNQ9UBG3 495 aaPredicted RBP9.09□□□□□ -0.95
CDCA3-208ENST00000540683 EGFL7Q9UHF1 273 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 POFUT2Q9Y2G5 429 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 CHST2Q9Y4C5 530 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 USF3Q68DE3 2245 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 PLCE1Q9P212 2302 aa9.09□□□□□ -0.95
CDCA3-208ENST00000540683 NAV3Q8IVL0 2385 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 CADP27708 2225 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 CENPBD1B2RD01 187 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 B9A039 149 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 E7EQL1 145 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 M0QX08 132 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF432O94892 652 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 FARS2O95363 451 aaKnown RBP9.08□□□□□ -0.96
CDCA3-208ENST00000540683 PTHP01270 115 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 IGF2P01344 180 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 IFNA2P01563 188 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 THRBP10828 461 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 CBR1P16152 277 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 AHCYP23526 432 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 EDNRAP25101 427 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 AQP1P29972 269 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms